Change the method of generating and sending tomogram ids #256
Workflow file for this run
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| name: Run tests and publish Python distribution to PyPI | |
| on: | |
| [push, pull_request] | |
| permissions: | |
| contents: read | |
| jobs: | |
| test: | |
| name: Build distribution and run tests | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ "3.9", "3.10", "3.11" ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install pytest pytest-mock pytest-datafiles | |
| pip install . | |
| - name: Test with pytest | |
| run: | | |
| pytest tests | |
| build: | |
| name: Build wheel for pypi | |
| needs: | |
| - test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Install pypa/build | |
| run: >- | |
| python3 -m | |
| pip install | |
| build | |
| --user | |
| - name: Build a binary wheel and a source tarball | |
| run: python3 -m build | |
| - name: Store the distribution packages | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| publish-to-pypi: | |
| name: >- | |
| Publish Python distribution to PyPI | |
| if: startsWith(github.ref, 'refs/tags/') # only publish to PyPI on tag pushes | |
| needs: | |
| - build | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: pypi | |
| url: https://pypi.org/p/cryoemservices | |
| permissions: | |
| id-token: write # IMPORTANT: mandatory for trusted publishing | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Publish distribution to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| github-release: | |
| name: >- | |
| Sign the Python distribution with Sigstore | |
| and upload them to GitHub Release | |
| needs: | |
| - publish-to-pypi | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write # IMPORTANT: mandatory for making GitHub Releases | |
| id-token: write # IMPORTANT: mandatory for sigstore | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Sign the dists with Sigstore | |
| uses: sigstore/[email protected] | |
| with: | |
| inputs: >- | |
| ./dist/*.tar.gz | |
| ./dist/*.whl | |
| - name: Create GitHub Release | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: >- | |
| gh release create | |
| '${{ github.ref_name }}' | |
| --repo '${{ github.repository }}' | |
| --notes "" | |
| - name: Upload artifact signatures to GitHub Release | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| # Upload to GitHub Release using the `gh` CLI. | |
| # `dist/` contains the built packages, and the | |
| # sigstore-produced signatures and certificates. | |
| run: >- | |
| gh release upload | |
| '${{ github.ref_name }}' dist/** | |
| --repo '${{ github.repository }}' |