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I am using panpipes to analyze CITEseq data, and managed to run the ingest workflow and get the resulting h5mu file. However, when I try to load the resulting 'x_unfilt.h5mu' file in a jupyter notebook using 'muon.read_h5mu()', I get an error that says: ' 'TypeError: init_from_dict() got an unexpected keyword argument 'matrix'.
The text was updated successfully, but these errors were encountered:
Hi @Yohana-Berhe i can't replicate your issue with the environment you provided in issue #126.
have you checked if the mudata is not corrupted? thanks!
I am using panpipes to analyze CITEseq data, and managed to run the ingest workflow and get the resulting h5mu file. However, when I try to load the resulting 'x_unfilt.h5mu' file in a jupyter notebook using 'muon.read_h5mu()', I get an error that says: ' 'TypeError: init_from_dict() got an unexpected keyword argument 'matrix'.
The text was updated successfully, but these errors were encountered: