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# DeepRank
# :warning: Archiving Note

This repository is no longer being maintained and has been archived for historical purposes.

We have now developed [DeepRank2](https://github.com/DeepRank/deeprank2), an improved and unified version of DeepRank-Mut, [DeepRank](https://github.com/DeepRank/deeprank), and [DeepRank-GNN](https://github.com/DeepRank/Deeprank-GNN).

:sparkles: DeepRank2 allows for transformation and storage of 3D representations of both protein-protein interfaces (PPIs) and protein single-residue variants (SRVs) into either graphs or volumetric grids containing structural and physico-chemical information. These can be used for training neural networks for a variety of patterns of interest, using either our pre-implemented training pipeline for graph neural networks (GNNs) or convolutional neural networks (CNNs) or external pipelines.

- :wrench: **Pull Requests** at [github.com/DeepRank/deeprank2/pulls](https://github.com/DeepRank/deeprank2/pulls)
- :bug: **Bugs**: Reports of bugs can be filed agains our new repo [github.com/DeepRank/deeprank2/issues](https://github.com/DeepRank/deeprank2/issues)
- :star: **Feature Requests**: Add your request or discuss the project w/ the community at [github.com/DeepRank/deeprank2/issues](https://github.com/DeepRank/deeprank2/issues)

We look forward to seeing you in our new space - [DeepRank2](https://github.com/DeepRank/deeprank2)!

# DeepRank-Mut

### Contents

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