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fix warnings
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ntxxt authored Sep 28, 2023
1 parent 768405a commit 8dce49b
Showing 1 changed file with 2 additions and 4 deletions.
6 changes: 2 additions & 4 deletions src/deeprank_gnn/predict.py
Original file line number Diff line number Diff line change
Expand Up @@ -39,10 +39,8 @@
# Constants
# TODO: Make these configurable
ESM_MODEL = "esm2_t33_650M_UR50D"
GNN_ESM_MODEL = (
Path(__file__).parent
/ "paper_pretrained_models/scoring_of_docking_models/gnn_esm/treg_yfnat_b64_e20_lr0.001_foldall_esm.pth.tar"
)
GNN_ESM_MODEL = "paper_pretrained_models/scoring_of_docking_models/gnn_esm/treg_yfnat_b64_e20_lr0.001_foldall_esm.pth.tar"

TOKS_PER_BATCH = 4096
REPR_LAYERS = [0, 32, 33]
TRUNCATION_SEQ_LENGTH = 2500
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