Skip to content
@Deep-MI

Deep Medical Imaging Lab (PI Reuter)

Repositories of the Reuter DeepMI Lab

Pinned Loading

  1. FastSurfer FastSurfer Public

    PyTorch implementation of FastSurferCNN

    Jupyter Notebook 461 120

  2. FatSegNet FatSegNet Public

    Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

    Python 22 12

  3. fsqc fsqc Public

    A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

    Python 57 14

  4. LaPy LaPy Public

    Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

    Python 64 14

  5. BrainPrint BrainPrint Public

    A python-only derivative of the original BrainPrint scripts

    Python 12 9

  6. olf-bulb-segmentation olf-bulb-segmentation Public

    Automated Olfactory Bulb Segmentation Pipeline for T2-Weighted MRI

    Jupyter Notebook 7 3

Repositories

Showing 10 of 17 repositories
  • fsqc Public

    A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

    Deep-MI/fsqc’s past year of commit activity
    Python 57 MIT 14 0 0 Updated Nov 14, 2024
  • FastSurfer Public

    PyTorch implementation of FastSurferCNN

    Deep-MI/FastSurfer’s past year of commit activity
    Jupyter Notebook 461 Apache-2.0 120 10 6 Updated Nov 13, 2024
  • head-motion-tools Public
    Deep-MI/head-motion-tools’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 11, 2024
  • Deep-MI.github.io Public

    Deep Medical Imaging Lab Webpage

    Deep-MI/Deep-MI.github.io’s past year of commit activity
    TeX 2 MIT 15 0 0 Updated Nov 6, 2024
  • hipsta Public

    HIPSTA - a python package for hippocampal shape and thickness analysis

    Deep-MI/hipsta’s past year of commit activity
    Python 3 MIT 0 1 0 Updated Sep 6, 2024
  • BrainPrint Public

    A python-only derivative of the original BrainPrint scripts

    Deep-MI/BrainPrint’s past year of commit activity
    Python 12 MIT 9 0 0 Updated Sep 4, 2024
  • WhipperSnapPy Public

    Python OpenGL Tool for Screenshots of Surface Overlays

    Deep-MI/WhipperSnapPy’s past year of commit activity
    Python 0 MIT 6 1 0 Updated Sep 2, 2024
  • LaPy Public

    Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

    Deep-MI/LaPy’s past year of commit activity
    Python 64 MIT 14 3 0 Updated Sep 2, 2024
  • VINNA4neonates Public

    Newborn Whole Brain Segmentation with VINNA

    Deep-MI/VINNA4neonates’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jul 10, 2024
  • DISCUS Public

    The repository contains code for the Geometric Deep Learning for Diffusion MRI Signal Reconstruction with Continuous Samplings (DISCUS) project

    Deep-MI/DISCUS’s past year of commit activity
    Python 4 0 1 0 Updated Apr 22, 2024
View all repositories

Most used topics

Loading…