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@Computational-Plant-Science

Computational Plant Science Lab

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  1. 3D_model_reconstruction_demo 3D_model_reconstruction_demo Public

    Implementation of the 3D reconstruction pipeline optimized for plant branching structures.

    C 16 4

  2. 3D_Sorghum_phenotyping_pipeline 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Python

  3. SMART SMART Public

    Plant phenotyping using computer vision: Compute geometrical traits and analyze plant surface colors

    Python 1

  4. 3D_model_traits_demo 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Python 6 1

  5. AI_U2net_color_clustering AI_U2net_color_clustering Public

    A machine learning model U2net and opencv based color clsutering method hat performs object segmentation in a single shot

    Python

  6. 3d_sorghum_segmentation 3d_sorghum_segmentation Public

    A machine learning model U2net and opencv based color clustering method that performs object segmentation in a single shot

    Python

Repositories

Showing 10 of 36 repositories
  • pycyapi Public

    unofficial Python CyVerse API client

    Computational-Plant-Science/pycyapi’s past year of commit activity
    Python 4 BSD-3-Clause 2 2 1 Updated Nov 25, 2024
  • ml_smart_docker Public

    Docker container for smart

    Computational-Plant-Science/ml_smart_docker’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 21, 2024
  • 3d_sorghum_segmentation Public

    A machine learning model U2net and opencv based color clustering method that performs object segmentation in a single shot

    Computational-Plant-Science/3d_sorghum_segmentation’s past year of commit activity
    Python 0 BSD-2-Clause 0 0 0 Updated Nov 19, 2024
  • 3D_Sorghum_phenotyping_pipeline Public

    Pipeline: Traits computation from 3D Sorghum root models

    Computational-Plant-Science/3D_Sorghum_phenotyping_pipeline’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 31, 2024
  • Computational-Plant-Science/3D_beanroot_phenotyping_pipeline’s past year of commit activity
    Makefile 0 BSD-3-Clause 0 0 0 Updated Oct 17, 2024
  • Computational-Plant-Science/Portable_3D_Scanner’s past year of commit activity
    Python 0 0 0 0 Updated Oct 16, 2024
  • SMART Public

    Plant phenotyping using computer vision: Compute geometrical traits and analyze plant surface colors

    Computational-Plant-Science/SMART’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Oct 3, 2024
  • 3D_model_traits_demo Public

    Computation of root phenes from 3D point clouds.

    Computational-Plant-Science/3D_model_traits_demo’s past year of commit activity
    Python 6 1 2 0 Updated Sep 27, 2024
  • AI_U2net_color_clustering Public

    A machine learning model U2net and opencv based color clsutering method hat performs object segmentation in a single shot

    Computational-Plant-Science/AI_U2net_color_clustering’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Sep 12, 2024
  • DIRTmu Public

    Automatic root hair extraction from microscopy images

    Computational-Plant-Science/DIRTmu’s past year of commit activity
    Python 3 BSD-3-Clause 2 3 0 Updated Aug 30, 2024

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