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Use on_architecture more liberally with boundary conditions (#3893)
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* Use on_architecture more liberally with boundary conditions

* Add test for FieldTimeSeries when CuArray bcs

* Too many ends

* Fix location of y-momentum flux

* Rm data after test

* Bump version

* Bump Enzyme version

* Downgrade Enzyme

---------

Co-authored-by: Navid C. Constantinou <[email protected]>
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glwagner and navidcy authored Nov 8, 2024
1 parent 4e22432 commit 5dd01dd
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Showing 5 changed files with 70 additions and 25 deletions.
4 changes: 2 additions & 2 deletions Project.toml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "Oceananigans"
uuid = "9e8cae18-63c1-5223-a75c-80ca9d6e9a09"
authors = ["Climate Modeling Alliance and contributors"]
version = "0.93.2"
version = "0.93.3"

[deps]
Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
Expand Down Expand Up @@ -50,7 +50,7 @@ CubedSphere = "0.2, 0.3"
Dates = "1.9"
Distances = "0.10"
DocStringExtensions = "0.8, 0.9"
Enzyme = "0.13.3"
Enzyme = "0.13.13"
FFTW = "1"
Glob = "1.3"
IncompleteLU = "0.2"
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21 changes: 15 additions & 6 deletions src/BoundaryConditions/field_boundary_conditions.jl
Original file line number Diff line number Diff line change
Expand Up @@ -39,12 +39,12 @@ default_auxiliary_bc(::LeftConnected, ::Face) = nothing
#####

mutable struct FieldBoundaryConditions{W, E, S, N, B, T, I}
west :: W
east :: E
south :: S
north :: N
bottom :: B
top :: T
west :: W
east :: E
south :: S
north :: N
bottom :: B
top :: T
immersed :: I
end

Expand All @@ -65,6 +65,15 @@ FieldBoundaryConditions(indices::Tuple, ::Nothing) = nothing
window_boundary_conditions(::Colon, left, right) = left, right
window_boundary_conditions(::UnitRange, left, right) = nothing, nothing

on_architecture(arch, fbcs::FieldBoundaryConditions) =
FieldBoundaryConditions(on_architecture(arch, fbcs.west),
on_architecture(arch, fbcs.east),
on_architecture(arch, fbcs.south),
on_architecture(arch, fbcs.north),
on_architecture(arch, fbcs.bottom),
on_architecture(arch, fbcs.top),
on_architecture(arch, fbcs.immersed))

"""
FieldBoundaryConditions(; kwargs...)
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28 changes: 15 additions & 13 deletions src/OutputReaders/field_time_series.jl
Original file line number Diff line number Diff line change
Expand Up @@ -214,16 +214,16 @@ Base.length(backend::PartlyInMemory) = backend.length
#####

mutable struct FieldTimeSeries{LX, LY, LZ, TI, K, I, D, G, ET, B, χ, P, N, KW} <: AbstractField{LX, LY, LZ, G, ET, 4}
data :: D
grid :: G
backend :: K
data :: D
grid :: G
backend :: K
boundary_conditions :: B
indices :: I
times :: χ
path :: P
name :: N
time_indexing :: TI
reader_kw :: KW
indices :: I
times :: χ
path :: P
name :: N
time_indexing :: TI
reader_kw :: KW

function FieldTimeSeries{LX, LY, LZ}(data::D,
grid::G,
Expand Down Expand Up @@ -460,10 +460,6 @@ function FieldTimeSeries(path::String, name::String;
isnothing(times) && (times = [file["timeseries/t/$i"] for i in iterations])
isnothing(location) && (Location = file["timeseries/$name/serialized/location"])

if boundary_conditions isa UnspecifiedBoundaryConditions
boundary_conditions = file["timeseries/$name/serialized/boundary_conditions"]
end

indices = try
file["timeseries/$name/serialized/indices"]
catch
Expand All @@ -480,6 +476,12 @@ function FieldTimeSeries(path::String, name::String;
end
end

if boundary_conditions isa UnspecifiedBoundaryConditions
boundary_conditions = file["timeseries/$name/serialized/boundary_conditions"]
boundary_conditions = on_architecture(architecture, boundary_conditions)
end


# This should be removed eventually... (4/5/2022)
grid = try
on_architecture(architecture, grid)
Expand Down
8 changes: 4 additions & 4 deletions src/OutputWriters/output_writer_utils.jl
Original file line number Diff line number Diff line change
Expand Up @@ -98,7 +98,7 @@ function saveproperty!(file, address, bcs::FieldBoundaryConditions)
if bc.condition isa Function || bc.condition isa ContinuousBoundaryFunction
file[address * "/$boundary/condition"] = missing
else
file[address * "/$boundary/condition"] = bc.condition
file[address * "/$boundary/condition"] = on_architecture(CPU(), bc.condition)
end
end
end
Expand Down Expand Up @@ -130,13 +130,13 @@ function serializeproperty!(file, address, grid::DistributedGrid)
file[address] = on_architecture(cpu_arch, grid)
end

function serializeproperty!(file, address, p::FieldBoundaryConditions)
function serializeproperty!(file, address, fbcs::FieldBoundaryConditions)
# TODO: it'd be better to "filter" `FieldBoundaryCondition` and then serialize
# rather than punting with `missing` instead.
if has_reference(Function, p)
if has_reference(Function, fbcs)
file[address] = missing
else
file[address] = p
file[address] = on_architecture(CPU(), fbcs)
end
end

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34 changes: 34 additions & 0 deletions test/test_output_readers.jl
Original file line number Diff line number Diff line change
Expand Up @@ -221,6 +221,40 @@ end
@test v1[2] isa Field
end
end

if arch isa GPU
@testset "FieldTimeSeries with CuArray boundary conditions [$(typeof(arch))]" begin
@info " Testing FieldTimeSeries with CuArray boundary conditions..."

x = y = z = (0, 1)
grid = RectilinearGrid(GPU(); size=(1, 1, 1), x, y, z)

τx = CuArray(zeros(size(grid)...))
τy = Field{Center, Face, Nothing}(grid)
u_bcs = FieldBoundaryConditions(top = FluxBoundaryCondition(τx))
v_bcs = FieldBoundaryConditions(top = FluxBoundaryCondition(τy))
model = NonhydrostaticModel(; grid, boundary_conditions = (; u=u_bcs, v=v_bcs))
simulation = Simulation(model; Δt=1, stop_iteration=1)

simulation.output_writers[:jld2] = JLD2OutputWriter(model, model.velocities,
filename = "test_cuarray_bc.jld2",
schedule=IterationInterval(1),
overwrite_existing = true)

run!(simulation)

ut = FieldTimeSeries("test_cuarray_bc.jld2", "u")
vt = FieldTimeSeries("test_cuarray_bc.jld2", "v")
@test ut.boundary_conditions.top.classification isa Flux
@test ut.boundary_conditions.top.condition isa Array

τy_ow = vt.boundary_conditions.top.condition
@test τy_ow isa Field{Center, Face, Nothing}
@test architecture(τy_ow) isa CPU
@test parent(τy_ow) isa Array
rm("test_cuarray_bc.jld2")
end
end
end

for arch in archs
Expand Down

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@glwagner
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Registration pull request created: JuliaRegistries/General/118992

Tip: Release Notes

Did you know you can add release notes too? Just add markdown formatted text underneath the comment after the text
"Release notes:" and it will be added to the registry PR, and if TagBot is installed it will also be added to the
release that TagBot creates. i.e.

@JuliaRegistrator register

Release notes:

## Breaking changes

- blah

To add them here just re-invoke and the PR will be updated.

Tagging

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if the Julia TagBot GitHub Action is installed, or can be done manually through the github interface, or via:

git tag -a v0.93.3 -m "<description of version>" 5dd01ddfe73dd03515b52e6499b27c1b61c71364
git push origin v0.93.3

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