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1. AbDecay_Regression_Test AbDecay_Regression_Test Public

   Test for a statistical difference between Antibody decay rates using a modified z-test and regression coefficients.

   R

2. AWS-Lambda-AgCartography AWS-Lambda-AgCartography Public

   Antigenic Cartography pipeline deployed on lambda. This pipeline interfaces with another lambda function that serves a dynamic HTML.

   R

3. SARS-CoV-2-VariantCallingPipe SARS-CoV-2-VariantCallingPipe Public

   This repo provides a bash script for paired-end variant calling of NGS derived RNA-seq data.

   Shell

4. AWS-Lambda-PMParser AWS-Lambda-PMParser Public

   A NLP model built on Python 3.9 that functions with AWS Lambda to provide summarized abstracts upon query.

   Python

5. collaborative-cross-locus-probabilities collaborative-cross-locus-probabilities Public

   Queries the University of North Carolina's Collaborative Cross genetics site for founder contribution probabilities at a given locus.

   Python

6. QTL2-implementation QTL2-implementation Public

   A shallow implementation of Karl Browman's QTL2 R package for Quantative Trait Loci (QTL) analysis.

   R