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Compiling Error on Ubuntu 16.04 #6

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apenngrace opened this issue Jun 13, 2017 · 15 comments
Closed

Compiling Error on Ubuntu 16.04 #6

apenngrace opened this issue Jun 13, 2017 · 15 comments

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@apenngrace
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Under Ubuntu 16.04, I get this error when running the make command.

/usr/include/string.h: In function ‘void* __mempcpy_inline(void*, const void*, size_t)’:
/usr/include/string.h:652:42: error: ‘memcpy’ was not declared in this scope
   return (char *) memcpy (__dest, __src, __n) + __n;
                                          ^
Makefile:1356: recipe for target 'src/gpujpeg_huffman_gpu_encoder.cu.o' failed
make[2]: *** [src/gpujpeg_huffman_gpu_encoder.cu.o] Error 1
make[2]: Leaving directory '/home/andrew/git_code/GPUJPEG'
Makefile:887: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/home/andrew/git_code/GPUJPEG'
Makefile:491: recipe for target 'all' failed
make: *** [all] Error 2
@MartinPulec
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MartinPulec commented Jun 13, 2017 via email

@apenngrace
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apenngrace commented Jun 13, 2017 via email

@apenngrace
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Unfortunately, that also fails:

NVCCFLAGS=-D_FORCE_INLINES ./autogen.sh
Makefile.am:86: warning: '%'-style pattern rules are a GNU make extension
Makefile.am:89: warning: '%'-style pattern rules are a GNU make extension
Makefile.am:93: warning: '%'-style pattern rules are a GNU make extension
Makefile.am:97: warning: '%'-style pattern rules are a GNU make extension
test/memcheck/Makefile.am:10: warning: deprecated feature: target 'memcheck' overrides 'memcheck$(EXEEXT)'
test/memcheck/Makefile.am:10: change your target to read 'memcheck$(EXEEXT)'
/usr/share/automake-1.15/am/program.am: target 'memcheck$(EXEEXT)' was defined here
test/memcheck/Makefile.am:5:   while processing program 'memcheck'
test/memcheck/Makefile.am:20: warning: deprecated feature: target 'memcheck_cuda.sh' overrides 'memcheck_cuda.sh$(EXEEXT)'
test/memcheck/Makefile.am:20: change your target to read 'memcheck_cuda.sh$(EXEEXT)'
/usr/share/automake-1.15/am/program.am: target 'memcheck_cuda.sh$(EXEEXT)' was defined here
test/memcheck/Makefile.am:4:   while processing program 'memcheck_cuda.sh'
test/memcheck/Makefile.am:13: warning: deprecated feature: target 'memcheck_local.sh' overrides 'memcheck_local.sh$(EXEEXT)'
test/memcheck/Makefile.am:13: change your target to read 'memcheck_local.sh$(EXEEXT)'
/usr/share/automake-1.15/am/program.am: target 'memcheck_local.sh$(EXEEXT)' was defined here
test/memcheck/Makefile.am:4:   while processing program 'memcheck_local.sh'
test/opengl_interop/Makefile.am:28: warning: '%'-style pattern rules are a GNU make extension
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking for style of include used by make... GNU
checking for gcc... clang
checking whether the C compiler works... no
configure: error: in `/home/andrew/git_code/GPUJPEG':
configure: error: C compiler cannot create executables
See `config.log' for more details
Autogen failed.
andrew GPUJPEG$ gcc
gcc: fatal error: no input files
compilation terminated.

@MartinPulec
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MartinPulec commented Jun 13, 2017 via email

@apenngrace
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apenngrace commented Jun 13, 2017 via email

@apenngrace
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Ok, after I installed clang, then I can run NVCCFLAGS=-D_FORCE_INLINES ./autogen.sh and make successfully.

@athirasivaraj
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where to input the command NVCCFLAGS=-D_FORCE_INLINES ./autogen.sh ???

@MartinPulec
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MartinPulec commented Mar 28, 2018 •
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@athirasivaraj Those NVCCFLAGS are flags that autogen.sh passes to nvcc compiler, autogen.sh just calls configure script. If you use another build system (MSVC, cmake) you need to pass -D_FORCE_INLINES to nvcc.

@xrucka
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xrucka commented Mar 29, 2018

@athirasivaraj :

Hi, I've look to our buildsystem, to see how the OBS builds gpujpeg. It's true that we do not call autogen with NVCCFLAGS, rather than patch the configure - see https://github.com/CESNET/GPUJPEG/blob/master/package_specs/ubuntu-1604-nvcc-compat.patch for details.

@athirasivaraj
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screenshot from 2018-03-29 11-27-17
iam attaching a screenshot. will this has any relation with nvcc..

@xrucka
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xrucka commented Mar 29, 2018 •
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@athirasivaraj This has no relation with nvcc. Apparently, sds++ is not reachable from directories listed in your PATH variable. You can confirm this hypothesis with command which sds++ .

@athirasivaraj
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ohk ... bt what should i do to rectify this issue as iam starting from the scrap and getting no idea..

@xrucka
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xrucka commented Mar 30, 2018 •
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@athirasivaraj : Things like this are Linux usage & programming basics, which you can look up in any Linux user guide and/or stackoverflow. As this "issues" are not related to our project at all, rather than basic usage, I'm closing this issue.

P.S. A fine book on linux programming: https://www.amazon.com/Beginning-Linux-Programming/dp/1861002971

P.S. The unrelated posts to the original problem will be deleted in about a week.

@xrucka xrucka closed this as completed Mar 30, 2018
@DanevenChin
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Hello, thank you very much for the code you shared.
I also encountered problems when compiling, as shown below

(lffd) qindanfeng@ubuntu:~/work/deep_learning/GPUJPEG$ cmake . -Bbuild
-- CUDA: 9.1
CMake Warning (dev) at /usr/local/share/cmake-3.13/Modules/FindOpenGL.cmake:270 (message):
  Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when
  available.  Run "cmake --help-policy CMP0072" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  FindOpenGL found both a legacy GL library:

    OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so

  and GLVND libraries for OpenGL and GLX:

    OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so
    OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so

  OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for
  compatibility with CMake 3.10 and below the legacy GL library will be used.
Call Stack (most recent call first):
  CMakeLists.txt:16 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Could NOT find GLEW (missing: GLEW_INCLUDE_DIR GLEW_LIBRARY) 
-- Could NOT find GLUT (missing: GLUT_glut_LIBRARY GLUT_INCLUDE_DIR) 
-- Configuring done
-- Generating done
-- Build files have been written to: /home/qindanfeng/work/deep_learning/GPUJPEG/build
(lffd) qindanfeng@ubuntu:~/work/deep_learning/GPUJPEG$ cmake --build build
[  5%] Building CXX object CMakeFiles/gpujpeg.dir/src/utils/image_delegate.cpp.o
In file included from /home/qindanfeng/work/deep_learning/GPUJPEG/src/utils/image_delegate.cpp:31:0:
/home/qindanfeng/work/deep_learning/GPUJPEG/src/utils/pam.hpp:48:1: error: expected unqualified-id before ‘[’ token
 [[maybe_unused]] static bool pam_read(const char *filename, unsigned int *width, unsigned int *height, in
 ^
CMakeFiles/gpujpeg.dir/build.make:838: recipe for target 'CMakeFiles/gpujpeg.dir/src/utils/image_delegate.cpp.o' failed
make[2]: *** [CMakeFiles/gpujpeg.dir/src/utils/image_delegate.cpp.o] Error 1
CMakeFiles/Makefile2:72: recipe for target 'CMakeFiles/gpujpeg.dir/all' failed
make[1]: *** [CMakeFiles/gpujpeg.dir/all] Error 2
Makefile:129: recipe for target 'all' failed
make: *** [all] Error 2
(lffd) qindanfeng@ubuntu:~/work/deep_learning/GPUJPEG$ nvcc -I. -Xcompiler -fPIC -o gpujpeg.so --shared src/gpujpeg_*c src/gpujpeg*cu # library
(lffd) qindanfeng@ubuntu:~/work/deep_learning/GPUJPEG$ nvcc -I -o gpujpeg src/*c src/*cu # console application
nvcc fatal   : Don't know what to do with 'gpujpeg'

How to solve it？

@MartinPulec
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Hi @DanevenChin, I've pushed a compatibility macro for older compilers. Next time please open a new issue if not referring exactly the same problem as in the original issue.

Thanks,
Martin

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5 participants
@apenngrace @xrucka @MartinPulec @athirasivaraj @DanevenChin