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disable print(snp_info_lst)
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xiaoyao00 committed May 24, 2022
1 parent 28ef9ab commit 8078069
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Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions LDlink/LDmatrix_plot_sub.py
Original file line number Diff line number Diff line change
Expand Up @@ -90,8 +90,8 @@ def replace_coords_rsid(db, snp_lst):
new_snp_lst.append(snp_raw_i)
else:
snp_info_lst = get_rsnum(db, snp_raw_i[0])
print("snp_info_lst")
print(snp_info_lst)
#print("snp_info_lst")
#print(snp_info_lst)
if snp_info_lst != None:
if len(snp_info_lst) > 1:
var_id = "rs" + snp_info_lst[0]['id']
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4 changes: 2 additions & 2 deletions LDlink/SNPclip.py
Original file line number Diff line number Diff line change
Expand Up @@ -112,8 +112,8 @@ def replace_coords_rsid(db, snp_lst):
new_snp_lst.append(snp_raw_i)
else:
snp_info_lst = get_rsnum(db, snp_raw_i[0], genome_build)
print("snp_info_lst")
print(snp_info_lst)
#print("snp_info_lst")
#print(snp_info_lst)
if snp_info_lst != None:
if len(snp_info_lst) > 1:
var_id = "rs" + snp_info_lst[0]['id']
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