minor URL changes for CRAN submission #224
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| name: R-CMD-check | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: windows-latest, r: 'release'} | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.posit.co/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.posit.co/cran/__linux__/focal/latest"} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| DISPLAY: :99 | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Install Chocolatey for windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| # Install Ghostscript & qpdf | |
| choco install ghostscript qpdf --source=https://chocolatey.org/api/v2/ | |
| choco install rtools | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - name: Clean Up Previous Check Directories | |
| if: runner.os != 'Windows' | |
| run: | | |
| find ${{ github.workspace }} -type d -name '.Rcheck' -exec rm -rf {} + | |
| working-directory: ${{ github.workspace }} | |
| - name: Install X11 dependencies on MacOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install --cask xquartz | |
| - name: Install imagemagick on MacOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install imagemagick | |
| R -e "install.packages(c('imager', 'imagerExtra', 'igraph', dependencies=TRUE))" | |
| - name: Install pandoc on MacOS | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install pandoc | |
| - name: Install Packages on Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt install ghostscript | |
| sudo apt install gsfonts | |
| sudo apt install libmagick++-dev | |
| sudo apt install libcurl4-openssl-dev | |
| sudo apt-get install -y pandoc | |
| R -e "install.packages(c('imager', 'magick', 'foreach', 'rcmdcheck', dependencies=TRUE))" | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
| shell: Rscript {0} | |
| - name: Install Pandoc for windows | |
| if: runner.os == 'Windows' | |
| run: | | |
| # Download and install Pandoc | |
| choco install pandoc | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| while read -r cmd | |
| do | |
| eval sudo $cmd | |
| done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
| - name: Install dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE, type = "source") | |
| remotes::install_cran("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: Use xvfb on Linux and MacOS | |
| if: runner.os != 'Windows' | |
| run: | | |
| Xvfb :99 & | |
| export DISPLAY=:99 | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| run: | | |
| options(crayon.enabled = TRUE) | |
| rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| # - name: Debug Workspace Content | |
| # run: ls -R ${{ github.workspace }} | |
| # - name: Set up R dependencies | |
| # uses: r-lib/actions/setup-r-dependencies@v2 | |
| # with: | |
| # extra-packages: any::rcmdcheck | |
| # needs: check | |
| # - name: Install virtual display for tk | |
| # run: sudo apt-get install xvfb | |
| # - name: Run R CMD check | |
| # run: xvfb-run R CMD check --no-manual . |