Refactor: separate bluepy and sonata access objects into different mo…

…dules (#135) * refactor: separate bluepy circuit access def from sonata * omit bluepycircuitaccess in coverage * separate BluepySimulationConfig and SonataSimulationConfig into different modules * omit bluepysimulationconfig from coverage * Hide 'BlueConfig' type from allowed arguments * remove unused import * add from __future__ import annotations * Fix type error in bluepysimulationconfig * docstr fix * use Protocol type in BluepyCircuitAccess * add from __future__ import annotations * cover Path type when assigning self._config * revert changes to BluepySimulationAccess' init * update copyrights
BlueBrain · Feb 23, 2024 · 2686141 · 2686141
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diff --git a/bluecellulab/cell/cell_dict.py b/bluecellulab/cell/cell_dict.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/core.py b/bluecellulab/cell/core.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/injector.py b/bluecellulab/cell/injector.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/plotting.py b/bluecellulab/cell/plotting.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/random.py b/bluecellulab/cell/random.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/section_distance.py b/bluecellulab/cell/section_distance.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/serialized_sections.py b/bluecellulab/cell/serialized_sections.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/sonata_proxy.py b/bluecellulab/cell/sonata_proxy.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/stimuli_generator.py b/bluecellulab/cell/stimuli_generator.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/cell/template.py b/bluecellulab/cell/template.py
@@ -1,4 +1,4 @@
-# Copyright 2012-2023 Blue Brain Project / EPFL
+# Copyright 2012-2024 Blue Brain Project / EPFL
 
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/bluecellulab/circuit/circuit_access/__init__.py b/bluecellulab/circuit/circuit_access/__init__.py
@@ -0,0 +1,3 @@
+from .definition import EmodelProperties, CircuitAccess, get_synapse_connection_parameters
+from .bluepy_circuit_access import BluepyCircuitAccess
+from .sonata_circuit_access import SonataCircuitAccess