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Code cleanup for relecov_core #121
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Daniel-VM
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Jul 19, 2024
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It looks good. Just few things to accomplish:
- There are a few missing refactorings of imports that need to be addressed globally in the PR.
- Local imports should follow a consistent structure accross files by importing the entire file rather than specific components.
- Follow plotly conventions when importing this library.
- There are aliases used inconsistently in local imports. We need to decide whether to use them for local imports or not.
relecov_dashboard/utils/graphics/variant_mutations_in_lineages_mutation_table.py
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I see some renaming left, where p.e "handling" can be removed from the file name |
Daniel-VM
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Jul 22, 2024
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LGTM
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This PR addresses several changes to the relecov_core code:
samples_handling.py
->samples.py
from
imports to include the whole library name in the import, in order to detect where the imported object come from in the code.