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profile chipqc rule for memory usage #163

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alexg9010 opened this issue Jan 21, 2021 · 0 comments
Open
2 tasks

profile chipqc rule for memory usage #163

alexg9010 opened this issue Jan 21, 2021 · 0 comments

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@alexg9010
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the chipqc rule uses a large amount of memory

  • perform memory profiling for a single sample to find bottlenecks
  • run counting per chunks instead of per chromosome
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