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Addtion of bwa-meth alternative workflow
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@alexg9010 alexg9010 released this 08 Jun 09:11
v0.1.2
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alexg9010 Alexander Blume
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Major changes:

  • addition of a parallel workflow based on bwa-meth
  • addition of methylation caller methylDackel
  • post-mapping analysis depends more on methylKits tabix-based database files
  • layout of the differential analysis in the settings has been adapted from PiGx-RNAseq -
  • differential analysis report was update with a new quality control section, more context descriptions for the figures and the functionality to identify regions of similar differential methylation (DMRs)
  • add multiqc reports per pipeline branch (bismark and/or bwameth )
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