release 1.7.1 #271
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Unit Tests & Code Coverage | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: # allow manual triggering | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| lint: | |
| name: Code style | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Install package | |
| run: | | |
| set -vxeuo pipefail | |
| python -m pip install --upgrade pip | |
| - name: Run ruff | |
| uses: davidslusser/[email protected] | |
| with: | |
| python_version: "3.11" | |
| # see .ruff.toml file for options | |
| test-matrix: | |
| name: Python ${{ matrix.python-version }} | |
| runs-on: ubuntu-latest | |
| needs: lint | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| # - "3.12" | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Create Python ${{ matrix.python-version }} environment | |
| # needed for Unpack step | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| cache-environment: true | |
| cache-environment-key: env-key-${{ matrix.python-version }} | |
| condarc: | | |
| channel-priority: flexible | |
| environment-file: environment.yml | |
| environment-name: anaconda-test-env-py-${{ matrix.python-version }} | |
| create-args: >- | |
| coveralls | |
| pytest | |
| pytest-cov | |
| python=${{ matrix.python-version }} | |
| setuptools-scm | |
| - name: Unpack | |
| run: | | |
| set -vxeuo pipefail | |
| pip install databroker-pack | |
| which databroker-pack | |
| which databroker-unpack | |
| cd resources | |
| bash ./unpack.sh | |
| cmd="import databroker;" | |
| cmd+=" print(list(databroker.catalog));" | |
| cmd+=" print(databroker.catalog_search_path());" | |
| python -c "${cmd}" | |
| cd .. | |
| # - name: Directory Listings | |
| # run: | | |
| # set -vxeuo pipefail | |
| # ls -lAFghR ~/.local/share/intake | |
| # ls -lAFghR /tmp/*_test/ | |
| - name: Start EPICS IOCs in Docker | |
| run: | | |
| set -vxeuo pipefail | |
| bash ./.github/scripts/iocmgr.sh start GP gp | |
| bash ./.github/scripts/iocmgr.sh start ADSIM ad | |
| docker ps -a | |
| ls -lAFgh /tmp/docker_ioc/iocad/ | |
| ls -lAFgh /tmp/docker_ioc/iocgp/ | |
| - name: Confirm EPICS IOC is available via caget | |
| shell: bash -l {0} | |
| run: | | |
| set -vxeuo pipefail | |
| docker exec iocgp grep float1 /home/iocgp/dbl-all.txt | |
| docker exec iocgp /opt/base/bin/linux-x86_64/caget gp:UPTIME gp:gp:float1 | |
| docker exec iocad /opt/base/bin/linux-x86_64/caget ad:cam1:Acquire_RBV | |
| which caget | |
| caget gp:UPTIME | |
| caget gp:gp:float1 | |
| caget ad:cam1:Acquire_RBV | |
| - name: Confirm EPICS IOC is available via PyEpics | |
| shell: bash -l {0} | |
| run: | | |
| python -c "import epics; print(epics.caget('gp:UPTIME'))" | |
| CMD="import epics" | |
| CMD+="; print(epics.caget('gp:UPTIME'))" | |
| python -c "${CMD}" | |
| - name: Confirm EPICS IOC is available via ophyd | |
| shell: bash -l {0} | |
| run: | | |
| CMD="import ophyd" | |
| CMD+="; up = ophyd.EpicsSignalRO('gp:UPTIME', name='up')" | |
| CMD+="; pv = ophyd.EpicsSignalRO('gp:gp:float1', name='pv')" | |
| CMD+="; up.wait_for_connection()" | |
| CMD+="; print(up.get(), pv.get())" | |
| python -c "${CMD}" | |
| - name: Test catalog length, expect 53 | |
| shell: bash -l {0} | |
| run: | | |
| CMD="import databroker" | |
| CMD+="; print(len(databroker.catalog['apstools_test']))" | |
| python -c "${CMD}" | |
| - name: Run tests with pytest & coverage | |
| shell: bash -l {0} | |
| run: | | |
| set -vxeuo pipefail | |
| coverage run --concurrency=thread --parallel-mode -m pytest -vvv --exitfirst . | |
| coverage combine | |
| coverage report --precision 3 | |
| - name: Upload coverage data to coveralls.io | |
| shell: bash -l {0} | |
| run: | | |
| set -vxeuo pipefail | |
| micromamba list coveralls | |
| which coveralls | |
| coveralls debug | |
| coveralls --service=github | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_FLAG_NAME: ${{ matrix.python-version }} | |
| COVERALLS_PARALLEL: true | |
| # https://coveralls-python.readthedocs.io/en/latest/usage/configuration.html#github-actions-support | |
| coveralls: | |
| name: Report unit test coverage to coveralls | |
| needs: test-matrix | |
| runs-on: ubuntu-latest | |
| container: python:3-slim | |
| steps: | |
| - name: Gather coverage and report to Coveralls | |
| run: | | |
| set -vxeuo pipefail | |
| echo "Finally!" | |
| pip3 install --upgrade coveralls | |
| # debug mode: output prepared json and reported files list to stdout | |
| # https://coveralls-python.readthedocs.io/en/latest/troubleshooting.html | |
| coveralls debug | |
| coveralls --service=github --finish | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} |