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Add testing workflow#9

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dfornika wants to merge 14 commits intomasterBCCDC-PHL/snippy-core-phylogenomics:masterfrom add-testing-workflowBCCDC-PHL/snippy-core-phylogenomics:add-testing-workflowCopy head branch name to clipboard

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Commits

Commits on Apr 10, 2024

• Add testing workflow

  dfornika

  committed
  dec852b

• whitespace

  dfornika

  committed
  7b45c7c

• main->master

  dfornika

  committed
  fa12f11

• wrong script name

  dfornika

  committed
  3ff7504

• make compatible with new nextflow

  dfornika

  committed
  48ea8f5

• use specific tag for snippy pipeline

  dfornika

  committed
  99819f7

• Add status badge

  dfornika

  committed
  89ee14c

• Adjust how snippy pipeline is run

  dfornika

  committed
  02a9f64

• Update pipeline scripts

  dfornika

  committed
  c9ef807

• Fix script

  dfornika

  committed
  d0ceec4

• Fix ref filename

  dfornika

  committed
  d2a91ce

• Fix ref filename

  dfornika

  committed
  648bfda

• Limit iqtree to 4 cores

  dfornika

  committed
  d5eaab9

• Check outputs

  dfornika

  committed
  4362c3f