Code

Update snp calling module#42

Code

Open

jpalmer37 wants to merge 5 commits intomainBCCDC-PHL/fluviewer-nf:mainfrom update-snp-callingBCCDC-PHL/fluviewer-nf:update-snp-callingCopy head branch name to clipboard

+210-240

Commits

Commits on Aug 9, 2024

• updates to snp-calling and related tools

  jpalmer37

  committed
  2b1c068

  Copy full SHA for 2b1c068

Commits on Sep 11, 2024

• full overhaul of aa_mutation_calling.py

  jpalmer37

  committed
  789989c

  Copy full SHA for 789989c

• updated snp_calling.nf module

  jpalmer37

  committed
  655fcc3

  Copy full SHA for 655fcc3

• update to blastx database to fix start positions (signal peptide not counted)

  jpalmer37

  committed
  12c9130

  Copy full SHA for 12c9130

• removed redundant function; moved it to tools.py

  jpalmer37

  committed
  8c02208

  Copy full SHA for 8c02208