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Add support for apptainer containers#39

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jpalmer37 wants to merge 8 commits intomainBCCDC-PHL/fluviewer-nf:mainfrom add-containersBCCDC-PHL/fluviewer-nf:add-containersCopy head branch name to clipboard

+163-22

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Commits on Aug 9, 2024

• updates to snp-calling and related tools

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  2b1c068

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• added apptainer def file for pipeline conda env

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  3723af0

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Commits on Aug 20, 2024

• made indentation consistent in nextflow.config

  jpalmer37

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  76cf92b

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• added singularity image files to .gitignore

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  cae6c02

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Commits on Aug 22, 2024

• added functional apptainer definition files

  jpalmer37

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  efda664

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• added apptainer to config; added overwrite = true for compatability with nextflow 24.04

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  91647dd

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• minor fix to primer channel needed for container support

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  907591e

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Commits on Aug 23, 2024

• Revert "updates to snp-calling and related tools"

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