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AstraZeneca

Data and AI: Unlocking new science insights

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  1. awesome-explainable-graph-reasoning awesome-explainable-graph-reasoning Public

    A collection of research papers and software related to explainability in graph machine learning.

    1.9k 130

  2. kallisto kallisto Public

    Efficiently calculate 3D-features for quantitative structure-activity relationship approaches.

    Python 62 21

  3. chemicalx chemicalx Public

    A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)

    Python 714 88

  4. rexmex rexmex Public

    A general purpose recommender metrics library for fair evaluation.

    Python 278 25

  5. SubTab SubTab Public

    The official implementation of the paper, "SubTab: Subsetting Features of Tabular Data for Self-Supervised Representation Learning"

    Python 143 20

  6. onto_merger onto_merger Public

    OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.

    HTML 92 6

Repositories

Showing 10 of 70 repositories
  • KAZU Public

    Fast, world class biomedical NER

    AstraZeneca/KAZU’s past year of commit activity
    Python 77 Apache-2.0 7 26 9 Updated Nov 25, 2024
  • biomedical-kg-topological-imbalance Public

    Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in Bioinformatics, 2022)

    AstraZeneca/biomedical-kg-topological-imbalance’s past year of commit activity
    Jupyter Notebook 16 Apache-2.0 0 0 0 Updated Nov 25, 2024
  • persist-seq-galaxy-tools-setup Public
    AstraZeneca/persist-seq-galaxy-tools-setup’s past year of commit activity
    Python 0 0 0 0 Updated Nov 15, 2024
  • Ovarian_genomics_HRD Public

    This repository contains the applicable source code that was used for data processing, visualisation and statistical analysis for a publication titled " Patterns of genomic instability in > 2000 patients with ovarian cancer across six clinical trials evaluating olaparib"

    AstraZeneca/Ovarian_genomics_HRD’s past year of commit activity
    R 1 0 0 0 Updated Nov 5, 2024
  • DiffAbXL Public

    The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs", formerly titled "Benchmarking Generative Models for Antibody Design".

    AstraZeneca/DiffAbXL’s past year of commit activity
    Python 50 Apache-2.0 5 0 0 Updated Oct 25, 2024
  • runnable Public

    Runnable

    AstraZeneca/runnable’s past year of commit activity
    Python 40 Apache-2.0 4 7 3 Updated Oct 19, 2024
  • jazzy Public

    Fast calculation of hydrogen-bond strengths and free energy of hydration of small molecules.

    AstraZeneca/jazzy’s past year of commit activity
    Python 78 6 3 16 Updated Oct 18, 2024
  • e2-bioprotac Public

    Bioinformatics data analyses - Taylor J. D. et al., Communications Biology 2024, doi: 10.1038/s42003-024-06803-4

    AstraZeneca/e2-bioprotac’s past year of commit activity
    1 Apache-2.0 0 0 0 Updated Sep 20, 2024
  • persist Public

    This provides the necessary code and a short tutorial to run PersiST, an exploratory tool for spatial 'omics datasets.

    AstraZeneca/persist’s past year of commit activity
    Python 1 1 0 0 Updated Aug 27, 2024
  • kgem-in-drug-discovery Public

    Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)

    AstraZeneca/kgem-in-drug-discovery’s past year of commit activity
    Python 32 Apache-2.0 6 0 0 Updated Aug 16, 2024
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