This is the repository for the collected scripts used in the study:
Jaron, K. S*., Parker, D. J*., Anselmetti, Y., Tran Van, P. T., Bast, J., Dumas, Z., Figuet, E., François, C. M., Hayward, K., Rossier, V., Simion, P., Robinson-Rechavi, M., Galtier, N., Schwander, T. 2022. Convergent consequences of parthenogenesis on stick insect genomes. Science Advances. 8 : eabg3842. doi: https://doi.org/10.1126/sciadv.abg3842
and is archived at Zenodo:
Raw sequence reads have been deposited in NCBI’s sequence read archive under the following bioprojects: PRJNA371785 (reference genomes, PRJNA670663 (resequenced individuals), PRJNA679785 (RNAseq reads used for annotation), and PRJNA673001 (PacBio reads for T. douglasi). Genome assemblies and annotations are deposited under bioproject PRJEB31411, and are also archived at Zenodo https://doi.org/10.5281/zenodo.5636226.