Updating lock files and requirements (#433)

Co-authored-by: benjijamorris <[email protected]>
AllenCellModeling · Oct 3, 2024 · a257968 · a257968
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commit a257968
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diff --git a/requirements/linux/all-requirements.txt b/requirements/linux/all-requirements.txt
@@ -113,7 +113,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/linux/docs-requirements.txt b/requirements/linux/docs-requirements.txt
@@ -111,7 +111,7 @@ mdurl==0.1.2
 mistune==0.8.4
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/linux/equiv-requirements.txt b/requirements/linux/equiv-requirements.txt
@@ -107,7 +107,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/linux/pdm.lock b/requirements/linux/pdm.lock
diff --git a/requirements/linux/requirements.txt b/requirements/linux/requirements.txt
@@ -23,8 +23,8 @@ bioio-czi==1.0.1
 bioio-ome-tiff==1.0.0
 bioio-tifffile==1.0.0
 blinker==1.8.2
-boto3==1.35.31
-botocore==1.35.31
+boto3==1.35.32
+botocore==1.35.32
 cachetools==5.5.0
 certifi==2024.8.30
 charset-normalizer==3.3.2
@@ -101,7 +101,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/linux/spharm-requirements.txt b/requirements/linux/spharm-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/linux/test-requirements.txt b/requirements/linux/test-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0
@@ -191,7 +191,7 @@ termcolor==2.4.0
 threadpoolctl==3.5.0
 tifffile==2023.2.28
 timm==1.0.9
-tomli==2.0.1; python_version < "3.11"
+tomli==2.0.2; python_version < "3.11"
 toolz==0.12.1
 torch==2.0.1
 torchmetrics==1.4.2

diff --git a/requirements/linux/torchserve-requirements.txt b/requirements/linux/torchserve-requirements.txt
@@ -104,7 +104,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/all-requirements.txt b/requirements/macos/all-requirements.txt
@@ -113,7 +113,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/docs-requirements.txt b/requirements/macos/docs-requirements.txt
@@ -111,7 +111,7 @@ mdurl==0.1.2
 mistune==0.8.4
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/equiv-requirements.txt b/requirements/macos/equiv-requirements.txt
@@ -107,7 +107,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/pdm.lock b/requirements/macos/pdm.lock
diff --git a/requirements/macos/requirements.txt b/requirements/macos/requirements.txt
@@ -23,8 +23,8 @@ bioio-czi==1.0.1
 bioio-ome-tiff==1.0.0
 bioio-tifffile==1.0.0
 blinker==1.8.2
-boto3==1.35.31
-botocore==1.35.31
+boto3==1.35.32
+botocore==1.35.32
 cachetools==5.5.0
 certifi==2024.8.30
 charset-normalizer==3.3.2
@@ -101,7 +101,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/spharm-requirements.txt b/requirements/macos/spharm-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/macos/test-requirements.txt b/requirements/macos/test-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0
@@ -191,7 +191,7 @@ termcolor==2.4.0
 threadpoolctl==3.5.0
 tifffile==2023.2.28
 timm==1.0.9
-tomli==2.0.1; python_version < "3.11"
+tomli==2.0.2; python_version < "3.11"
 toolz==0.12.1
 torch==2.0.1
 torchmetrics==1.4.2

diff --git a/requirements/macos/torchserve-requirements.txt b/requirements/macos/torchserve-requirements.txt
@@ -104,7 +104,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/all-requirements.txt b/requirements/windows/all-requirements.txt
@@ -113,7 +113,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/docs-requirements.txt b/requirements/windows/docs-requirements.txt
@@ -111,7 +111,7 @@ mdurl==0.1.2
 mistune==0.8.4
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/equiv-requirements.txt b/requirements/windows/equiv-requirements.txt
@@ -107,7 +107,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/pdm.lock b/requirements/windows/pdm.lock
diff --git a/requirements/windows/requirements.txt b/requirements/windows/requirements.txt
@@ -23,8 +23,8 @@ bioio-czi==1.0.1
 bioio-ome-tiff==1.0.0
 bioio-tifffile==1.0.0
 blinker==1.8.2
-boto3==1.35.31
-botocore==1.35.31
+boto3==1.35.32
+botocore==1.35.32
 cachetools==5.5.0
 certifi==2024.8.30
 charset-normalizer==3.3.2
@@ -101,7 +101,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/spharm-requirements.txt b/requirements/windows/spharm-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0

diff --git a/requirements/windows/test-requirements.txt b/requirements/windows/test-requirements.txt
@@ -106,7 +106,7 @@ matplotlib==3.9.2
 mdurl==0.1.2
 mlflow==2.16.2
 mlflow-skinny==2.16.2
-monai-weekly==1.4.dev2439
+monai==1.3.2
 mpmath==1.3.0
 msgpack==1.1.0
 multidict==6.1.0
@@ -191,7 +191,7 @@ termcolor==2.4.0
 threadpoolctl==3.5.0
 tifffile==2023.2.28
 timm==1.0.9
-tomli==2.0.1; python_version < "3.11"
+tomli==2.0.2; python_version < "3.11"
 toolz==0.12.1
 torch==2.0.1
 torchmetrics==1.4.2