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Merge pull request #45 from AllenCell/admin/requirements-update_2024-…
…11-20_21-30 admin/requirements-update_2024-11-20_21-30
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -8,8 +8,6 @@ aicsshparam==0.1.7 | |
| aiohttp==3.9.3 | ||
| aiosignal==1.3.1 | ||
| annotated-types==0.6.0 | ||
| annoy==1.17.3 | ||
| appnope==0.1.3; platform_system == "Darwin" | ||
| argon2-cffi==23.1.0 | ||
| argon2-cffi-bindings==21.2.0 | ||
| argparse==1.4.0 | ||
|
|
@@ -18,24 +16,21 @@ astropy==5.2.2 | |
| asttokens==2.4.1 | ||
| async-timeout==4.0.3; python_version < "3.11" | ||
| attrs==23.2.0 | ||
| av==11.0.0 | ||
| av==12.3.0 | ||
| backoff==1.11.1 | ||
| beautifulsoup4==4.12.3 | ||
| bigtree==0.16.1 | ||
| bioio==1.0.2 | ||
| bioio-base==1.0.1 | ||
| bigtree==0.19.3 | ||
| bioio==1.0.3 | ||
| bioio-base==1.0.4 | ||
| bioio-ome-zarr==1.0.1 | ||
| bleach==6.1.0 | ||
| bokeh==3.1.1 | ||
| botocore==1.34.32 | ||
| certifi==2023.11.17 | ||
| cffi==1.16.0 | ||
| charset-normalizer==3.3.2 | ||
| click==8.1.7 | ||
| cloudpickle==3.0.0 | ||
| colorama==0.4.6; sys_platform == "win32" or platform_system == "Windows" | ||
| colorcet==3.0.1 | ||
| colorizer-data @ git+https://github.com/allen-cell-animated/[email protected] | ||
| colorizer-data @ git+https://github.com/allen-cell-animated/[email protected] | ||
| colour-science==0.4.4 | ||
| comm==0.2.1 | ||
| contourpy==1.1.1 | ||
|
|
@@ -52,7 +47,7 @@ exceptiongroup==1.2.0; python_version < "3.11" | |
| executing==2.0.1 | ||
| fasteners==0.19 | ||
| fastjsonschema==2.19.1 | ||
| fire==0.5.0 | ||
| fire==0.6.0 | ||
| fonttools==4.47.2 | ||
| frozenlist==1.4.1 | ||
| fsspec==2023.6.0 | ||
|
|
@@ -61,25 +56,17 @@ imagecodecs==2023.3.16 | |
| imageio==2.27.0 | ||
| imageio-ffmpeg==0.4.9 | ||
| importlib-metadata==7.0.1 | ||
| importlib-resources==6.1.1; python_version < "3.10" | ||
| importlib-resources==6.1.1; python_version < "3.10" or sys_platform != "emscripten" | ||
| iniconfig==2.0.0 | ||
| ipydatawidgets==4.3.2 | ||
| ipykernel==6.29.0 | ||
| ipympl==0.9.3 | ||
| ipykernel==6.29.5 | ||
| ipython==8.18.1 | ||
| ipython-genutils==0.2.0 | ||
| ipywidgets==7.8.1 | ||
| itk==5.3.0 | ||
| itk-core==5.3.0 | ||
| itk-filtering==5.3.0 | ||
| itk-io==5.3.0 | ||
| itk-meshtopolydata==0.10.0 | ||
| itk-numerics==5.3.0 | ||
| itk-registration==5.3.0 | ||
| itk-segmentation==5.3.0 | ||
| itkwidgets==0.32.6 | ||
| ipywidgets==8.1.3 | ||
| itkwasm==1.0b175 | ||
| itkwasm-downsample==1.3.0 | ||
| itkwasm-downsample-wasi==1.3.0; sys_platform != "emscripten" | ||
| jedi==0.19.1 | ||
| Jinja2==3.1.3 | ||
| jinja2==3.1.3 | ||
| jmespath==1.0.1 | ||
| joblib==1.3.2 | ||
| jsonpickle==2.2.0 | ||
|
|
@@ -90,84 +77,67 @@ jupyter-client==8.6.0 | |
| jupyter-console==6.6.3 | ||
| jupyter-core==5.7.1 | ||
| jupyterlab-pygments==0.3.0 | ||
| jupyterlab-widgets==1.1.7; python_version >= "3.6" | ||
| jupyterlab-widgets==3.0.11 | ||
| kiwisolver==1.4.5 | ||
| labkey==1.4.1 | ||
| lazy-loader==0.3 | ||
| linkify-it-py==2.0.2 | ||
| lkaccess==1.4.25 | ||
| llvmlite==0.41.1 | ||
| locket==1.0.0 | ||
| lxml==4.9.4 | ||
| lxml-stubs==0.5.1 | ||
| markdown==3.5.2 | ||
| markdown-it-py==3.0.0 | ||
| markupsafe==2.1.4 | ||
| marshmallow==3.21.1 | ||
| matplotlib==3.7.4 | ||
| matplotlib==3.9.1 | ||
| matplotlib-inline==0.1.6 | ||
| mdit-py-plugins==0.4.0 | ||
| mdurl==0.1.2 | ||
| mistune==3.0.2 | ||
| moviepy==1.0.3 | ||
| msgpack==1.0.7 | ||
| multidict==6.0.4 | ||
| mypy==1.8.0 | ||
| mypy==1.11.0 | ||
| mypy-extensions==1.0.0 | ||
| nbclient==0.9.0 | ||
| nbconvert==7.14.2 | ||
| nbformat==5.9.2 | ||
| nest-asyncio==1.6.0 | ||
| networkx==3.1 | ||
| ngff-zarr==0.8.5 | ||
| notebook==6.4.13 | ||
| numba==0.58.1 | ||
| numcodecs==0.12.1 | ||
| numpy==1.23.5 | ||
| numpy==1.26.4 | ||
| ome-types==0.5.1.post1 | ||
| ome-zarr==0.8.3 | ||
| opencv-python-headless==4.10.0.82 | ||
| opencv-stubs==0.0.8 | ||
| opencv-python-headless==4.10.0.84 | ||
| opencv-stubs==0.0.10 | ||
| packaging==23.2 | ||
| pacmap==0.7.2 | ||
| pandas==1.5.1 | ||
| pandas-stubs==2.0.1.230501 | ||
| pandas==1.5.3 | ||
| pandas-stubs==2.2.2.240603 | ||
| pandocfilters==1.5.1 | ||
| panel==1.2.3 | ||
| param==2.0.2 | ||
| parso==0.8.3 | ||
| partd==1.4.1 | ||
| pathlib==1.0.1 | ||
| patsy==0.5.6 | ||
| pexpect==4.9.0; sys_platform != "win32" | ||
| pillow==10.2.0 | ||
| platformdirs==4.2.0 | ||
| plotly==5.18.0 | ||
| pluggy==1.4.0 | ||
| pluggy==1.5.0 | ||
| pooch==1.8.0 | ||
| proglog==0.1.10 | ||
| prometheus-client==0.19.0 | ||
| prompt-toolkit==3.0.43 | ||
| psutil==5.9.8 | ||
| ptyprocess==0.7.0; sys_platform != "win32" or os_name != "nt" | ||
| pure-eval==0.2.2 | ||
| pyaml==20.4.0 | ||
| pyarrow==15.0.0 | ||
| pyarrow==17.0.0 | ||
| pycparser==2.21 | ||
| pyct==0.5.0 | ||
| pydantic==2.6.0 | ||
| pydantic-compat==0.1.2 | ||
| pydantic-core==2.16.1 | ||
| pyerfa==2.0.0.3 | ||
| pygments==2.17.2 | ||
| pyparsing==3.1.1 | ||
| pyshtools==4.10 | ||
| pytest==8.0.0 | ||
| pytest==8.3.2 | ||
| python-dateutil==2.8.2 | ||
| pytz==2023.4 | ||
| pyviz-comms==3.0.1 | ||
| PyWavelets==1.4.1 | ||
| pywin32==306; sys_platform == "win32" and platform_python_implementation != "PyPy" | ||
| pywinpty==2.0.12; os_name == "nt" | ||
| PyYAML==6.0.1 | ||
| pyzmq==25.1.2 | ||
| qtconsole==5.5.1 | ||
|
|
@@ -176,21 +146,22 @@ referencing==0.33.0 | |
| rehash==1.0.1 | ||
| requests==2.31.0 | ||
| resource-backed-dask-array==0.1.0 | ||
| rich==13.7.1 | ||
| rich-argparse==1.5.2 | ||
| rpds-py==0.17.1 | ||
| s3fs==0.4.2 | ||
| scikit-image==0.21.0 | ||
| scikit-learn==1.3.2 | ||
| scipy==1.10.1 | ||
| scikit-image==0.22.0 | ||
| scikit-learn==1.5.1 | ||
| scipy==1.13.1 | ||
| seaborn==0.13.2 | ||
| semver==3.0.2 | ||
| Send2Trash==1.8.2 | ||
| setuptools==69.0.3 | ||
| shapely==2.0.2 | ||
| shapely==2.0.5 | ||
| six==1.16.0 | ||
| sortedcontainers==2.4.0 | ||
| soupsieve==2.5 | ||
| stack-data==0.6.3 | ||
| statsmodels==0.14.1 | ||
| tblib==3.0.0 | ||
| tenacity==8.1.0 | ||
| termcolor==2.4.0 | ||
|
|
@@ -201,42 +172,39 @@ tinycss2==1.2.1 | |
| tomli==2.0.1; python_version < "3.11" | ||
| toolz==0.12.1 | ||
| tornado==6.4 | ||
| tqdm==4.66.1 | ||
| tqdm==4.66.4 | ||
| traitlets==5.6.0 | ||
| traittypes==0.2.1 | ||
| types-colorama==0.4.15.20240205 | ||
| types-decorator==5.1.8.20240106 | ||
| types-colorama==0.4.15.20240311 | ||
| types-decorator==5.1.8.20240310 | ||
| types-docutils==0.20.0.20240227 | ||
| types-jsonschema==4.21.0.20240118 | ||
| types-openpyxl==3.1.0.20240301 | ||
| types-Pillow==10.2.0.20240213 | ||
| types-psutil==5.9.5.20240205 | ||
| types-pycurl==7.45.2.20240106 | ||
| types-Pygments==2.17.0.20240106 | ||
| types-jsonschema==4.23.0.20240712 | ||
| types-openpyxl==3.1.5.20240719 | ||
| types-Pillow==10.2.0.20240520 | ||
| types-psutil==6.0.0.20240621 | ||
| types-pycurl==7.45.3.20240421 | ||
| types-Pygments==2.18.0.20240506 | ||
| types-pytz==2024.1.0.20240203 | ||
| types-PyYAML==6.0.12.12 | ||
| types-PyYAML==6.0.12.20240724 | ||
| types-Send2Trash==1.8.2.7 | ||
| types-setuptools==69.1.0.20240223 | ||
| types-six==1.16.21.20240301 | ||
| types-six==1.16.21.20240513 | ||
| types-termcolor==1.1.6.2 | ||
| types-tqdm==4.66.0.20240106 | ||
| types-tqdm==4.66.0.20240417 | ||
| typing-extensions==4.9.0 | ||
| typing-inspect==0.9.0 | ||
| uc-micro-py==1.0.2 | ||
| urllib3==1.26.18 | ||
| vtk==9.3.0 | ||
| vtk-osmesa==9.3.0 | ||
| vtk-osmesa==9.3.1 | ||
| wasmtime==23.0.0; sys_platform != "emscripten" | ||
| wcwidth==0.2.13 | ||
| webencodings==0.5.1 | ||
| widgetsnbextension==3.6.6 | ||
| widgetsnbextension==4.0.11 | ||
| wrapt==1.16.0 | ||
| xarray==2023.1.0 | ||
| xmlschema==3.0.1 | ||
| xsdata==24.1 | ||
| xyzservices==2023.10.1 | ||
| yarl==1.9.4 | ||
| zarr==2.15.0 | ||
| zict==3.0.0 | ||
| zipp==3.17.0 | ||
| zstandard==0.22.0 | ||
| --extra-index-url https://wheels.vtk.org | ||
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