lint #254

	name: Test and lint

	on: [push]

	jobs:
	build:
	name: ${{ matrix.os }} python${{ matrix.python-version}}
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest]
	python-version: ["3.8", "3.9", "3.10", "3.11"]

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}

	# these libraries, along with pytest-xvfb (added in the `deps` in tox.ini),
	# enable testing on Qt on linux
	- name: Install Linux libraries
	if: runner.os == 'Linux'
	run: \|
	sudo apt-get install -y libdbus-1-3 libxkbcommon-x11-0 libxcb-icccm4 \
	libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 \
	libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 x11-utils
	# strategy borrowed from vispy for installing opengl libs on windows
	- name: Install Windows OpenGL
	if: runner.os == 'Windows'
	run: \|
	git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git
	powershell gl-ci-helpers/appveyor/install_opengl.ps1
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .[test_lint]
	- name: Lint with Black
	run: \|
	black --check --verbose .
	- name: Test with pytest
	run: \|
	pytest -v --color=yes --cov=allencell_ml_segmenter --cov-report=xml
	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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