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@akrinos akrinos released this 03 Sep 13:45
· 1 commit to master since this release

Update to prior release to add tab removal step for phylodb database. In this release, we address several long-standing issues in EUKulele and add a new feature.

  • Changes the name of the pident column to reflect that it is really the best quality score
  • Fixed issues related to errors of "MissingFromTaxDict" (#60)
  • Allowed gzipped database fastas to be used (nf-core/metatdenovo#256)
  • Newest version of EukProt now downloads with EUKulele and EukProt protein map bugs have been resolved; gzipped version of fasta also downloads (#66)
  • Fixed database download issues for GTDB add-on
  • Updated calls to append with calls to concat (pandas)
  • Fixed some instances of spaces being introduced to taxonomy strings during parsing

New feature:

  • Added a flag, --create_euk_fasta, to dump a fasta file of eukaryotic sequences after a EUKulele run (#35)