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Update PelePhysics (#831)
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baperry2 authored Jul 26, 2024
1 parent 57a913f commit cf367bd
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Showing 3 changed files with 16 additions and 2 deletions.
13 changes: 12 additions & 1 deletion CMake/BuildPelePhysicsLib.cmake
Original file line number Diff line number Diff line change
Expand Up @@ -46,6 +46,17 @@ function(build_pele_physics_lib pele_physics_lib_name)
${PELE_PHYSICS_UTILITY_DIR}/PltFileManager/PltFileManagerBCFill.H)
target_include_directories(${pele_physics_lib_name} PUBLIC ${PELE_PHYSICS_UTILITY_DIR}/PltFileManager)

target_sources(${pele_physics_lib_name}
PRIVATE
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/BlackBoxFunction.cpp
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/BlackBoxFunction.H
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/BlackBoxFunctionFactory.H
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/NeuralNetHomerolled.H
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/NeuralNetLayerDef.H
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/NeuralNetModelDef.H
${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction/Table.H)
target_include_directories(${pele_physics_lib_name} PUBLIC ${PELE_PHYSICS_UTILITY_DIR}/BlackBoxFunction)

target_sources(${pele_physics_lib_name}
PRIVATE
${PELE_PHYSICS_UTILITY_DIR}/Filter/Filter.cpp
Expand Down Expand Up @@ -159,7 +170,7 @@ function(build_pele_physics_lib pele_physics_lib_name)
target_include_directories(${pele_physics_lib_name} PUBLIC ${PELE_PHYSICS_SPRAY_DIR}/Distribution)
target_include_directories(${pele_physics_lib_name} PUBLIC ${PELE_PHYSICS_SPRAY_DIR}/BreakupSplash)
endif()

if(PELE_PHYSICS_ENABLE_SOOT)
set(SOOT_MOMENTS_VALUES 3 6)
if(NOT PELE_PHYSICS_NUM_SOOT_MOMENTS IN_LIST SOOT_MOMENTS_VALUES)
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3 changes: 3 additions & 0 deletions Exec/Make.PeleC
Original file line number Diff line number Diff line change
Expand Up @@ -41,6 +41,9 @@ Blocs += $(UTILITY_HOME)/Diagnostics
Bpack += $(UTILITY_HOME)/Filter/Make.package
Blocs += $(UTILITY_HOME)/Filter

Bpack += $(UTILITY_HOME)/BlackBoxFunction/Make.package
Blocs += $(UTILITY_HOME)/BlackBoxFunction

all: $(executable)
ifneq ($(KEEP_BUILDINFO_CPP),TRUE)
$(SILENT) $(RM) AMReX_buildInfo.cpp
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2 changes: 1 addition & 1 deletion Submodules/PelePhysics
Submodule PelePhysics updated 90 files
+1 −0 .codespell-ignore-words
+18 −5 .github/workflows/ci.yml
+1 −9 Mechanisms/Aromatic_KrNara/Make.package
+1 −9 Mechanisms/BurkeDryer/Make.package
+1 −9 Mechanisms/C1-C2-NO/Make.package
+1 −9 Mechanisms/C1-C2-NO_qss/Make.package
+1 −9 Mechanisms/CH4_lean/Make.package
+1 −9 Mechanisms/CH4_lean_qss/Make.package
+1 −9 Mechanisms/Davis/Make.package
+1 −9 Mechanisms/FFCM1_Red/Make.package
+1 −9 Mechanisms/H2-CO-CO2-3spec/Make.package
+1 −9 Mechanisms/HP_DME/Make.package
+1 −9 Mechanisms/IonizedAir/Make.package
+1 −9 Mechanisms/JL4/Make.package
+1 −9 Mechanisms/Kolla/Make.package
+1 −9 Mechanisms/LiDryer/Make.package
+1 −9 Mechanisms/LuDME/Make.package
+1 −9 Mechanisms/LuEthylene/Make.package
+1 −9 Mechanisms/LuEthylene_qss/Make.package
+1 −9 Mechanisms/NUIGalway/Make.package
+1 −9 Mechanisms/Null/Make.package
+6 −1 Mechanisms/Null/mechanism.H
+4 −2 Mechanisms/Null/mechanism.cpp
+1 −9 Mechanisms/SootReaction/Make.package
+1 −9 Mechanisms/air/Make.package
+1 −9 Mechanisms/alzeta/Make.package
+1 −9 Mechanisms/chem-CH4-2step/Make.package
+1 −9 Mechanisms/chem-H/Make.package
+1 −9 Mechanisms/decane_3sp/Make.package
+1 −9 Mechanisms/dodecane_lu/Make.package
+1 −9 Mechanisms/dodecane_lu_qss/Make.package
+1 −9 Mechanisms/dodecane_wang/Make.package
+1 −9 Mechanisms/dodmethair_4sp/Make.package
+1 −9 Mechanisms/drm19/Make.package
+1 −9 Mechanisms/ethylene_af/Make.package
+1 −9 Mechanisms/grimech12/Make.package
+1 −9 Mechanisms/grimech30-noArN/Make.package
+1 −9 Mechanisms/grimech30/Make.package
+1 −9 Mechanisms/heptane_3sp/Make.package
+1 −9 Mechanisms/heptane_fc/Make.package
+1 −9 Mechanisms/heptane_lu_88sk/Make.package
+1 −9 Mechanisms/heptane_lu_qss/Make.package
+1 −9 Mechanisms/isooctane_lu/Make.package
+1 −9 Mechanisms/methaneIons_diRenzo/Make.package
+1 −9 Mechanisms/ndodecane_35/Make.package
+1 −9 Mechanisms/nitrogens/Make.package
+1 −9 Mechanisms/propane_fc/Make.package
+1 −9 Mechanisms/sCO2/Make.package
+6 −0 Source/Eos/EOS.H
+21 −0 Source/Eos/EOS.cpp
+174 −0 Source/Eos/EosParams.H
+32 −0 Source/Eos/Fuego.H
+110 −75 Source/Eos/GammaLaw.H
+365 −0 Source/Eos/Manifold.H
+32 −0 Source/Eos/SRK.H
+30 −0 Source/PelePhysicsConstraints.H
+126 −0 Source/Transport/Manifold.H
+3 −0 Source/Transport/Transport.H
+61 −0 Source/Transport/TransportParams.H
+3 −0 Source/Transport/TransportTypes.H
+86 −0 Source/Utility/BlackBoxFunction/BlackBoxFunction.H
+14 −0 Source/Utility/BlackBoxFunction/BlackBoxFunction.cpp
+104 −0 Source/Utility/BlackBoxFunction/BlackBoxFunctionFactory.H
+6 −0 Source/Utility/BlackBoxFunction/Make.package
+331 −0 Source/Utility/BlackBoxFunction/NeuralNetHomerolled.H
+391 −0 Source/Utility/BlackBoxFunction/NeuralNetLayerDef.H
+332 −0 Source/Utility/BlackBoxFunction/NeuralNetModelDef.H
+551 −0 Source/Utility/BlackBoxFunction/Table.H
+2 −0 Source/Utility/PltFileManager/PltFileManager.H
+1 −1 Source/Utility/PltFileManager/PltFileManager.cpp
+1 −1 Submodules/amrex
+4 −0 Support/CMLM/README
+ Support/CMLM/fgm_net.pnn
+19 −0 Support/CMLM/fgm_net_info.txt
+ Support/CMLM/peletable_2dim_10grid
+ Support/CMLM/peletable_trans_2dim_10grid
+8 −0 Testing/Exec/EosEval/GNUmakefile
+37 −20 Testing/Exec/EosEval/GPU_misc.H
+15 −0 Testing/Exec/EosEval/inputs.2d.network
+11 −0 Testing/Exec/EosEval/inputs.2d.table2d
+56 −27 Testing/Exec/EosEval/main.cpp
+18 −0 Testing/Exec/Make.PelePhysics
+0 −38 Testing/Exec/ProductionRateEval/GNUmakefile
+0 −0 Testing/Exec/ProductionRateEval/inputs.2d
+0 −177 Testing/Exec/ProductionRateEval/main.cpp
+9 −0 Testing/Exec/TranEval/GNUmakefile
+9 −6 Testing/Exec/TranEval/GPU_misc.H
+14 −0 Testing/Exec/TranEval/inputs.2d_Manifold
+11 −0 Testing/Exec/TranEval/inputs.2d_Network
+9 −0 Testing/Exec/TranEval/main.cpp

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