Code

Stomach#236

Code

Merged

rchristie merged 34 commits intoABI-Software:mainABI-Software/scaffoldmaker:mainfrom mlin865:stomachmlin865/scaffoldmaker:stomachCopy head branch name to clipboardAug 24, 2023

+1,185-1,570

Commits

Commits on Jul 5, 2023

• Update derivatives at apex and Richard's suggestions

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  c55b30f

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Commits on Jul 6, 2023

• Add points along fundus on central path

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  b7a20c3

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• Correct typo to gastro-esophageal

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  6bcc1a9

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• Pre-calculate how to spread out elements along

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  5fbdd1c

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• Remove return of elementCountGroupList

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Commits on Jul 7, 2023

• Remove unused code

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  fa3c272

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• Merge remote-tracking branch 'abi/main' into stomach

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  5e36d44

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Commits on Jul 18, 2023

• Update antrum to 0.3, fundus to 0.7 in material coordinates

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Commits on Jul 19, 2023

• Implement hemisphere and cubic hermite functions for material coordinates

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Commits on Jul 21, 2023

• Update central paths to make smooth track surfaces

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  67c6296

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• Update central path unit scale and align axis origin to fundus-body intersection

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• Update human 1 central path

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Commits on Jul 31, 2023

• Update generateMesh for track surface

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  855c7bc

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• Make d1 at apex zero for track surface

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Commits on Aug 8, 2023

• Distribute elements along each region equally using track surface

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  dcc3e4b

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Commits on Aug 9, 2023

• Remove use of elements between fundus apex to cardia and cardia to duodenum

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Commits on Aug 10, 2023

• Allow variable elements around esophagus

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  c67e1d3

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• Clean up code

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Commits on Aug 11, 2023

• Fix linear mapping at corners around annulus

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  140fa60

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• Make smooth curves from apex to annulus and annulus to body

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Commits on Aug 14, 2023

• Allow refinement of cardia surface elements

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  02d81a6

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• Allow number of elements along stomach

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Commits on Aug 15, 2023

• Update mouse central path for apex and flatter duodenum

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  43f94ff

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• Update number of elements for parameter sets

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  1aad953

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• Update unit tests

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  d112608

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• Merge remote-tracking branch 'abi/main' into stomach

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  6aa3cea

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• Merge remote-tracking branch 'abi/main' into stomach

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  e6ba9fd

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Commits on Aug 22, 2023

• Fix problem with large number of elements around duodenum

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  bdd69df

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Commits on Aug 23, 2023

• Make derivatives around annulus in correct direction and magnitude

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  2a30ea8

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Commits on Aug 24, 2023

• Set minimum elements in fundus and pylorus

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  b65e498

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• Update mouse and rat central paths

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  5704223

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• Update curvature for derivatives around annulus

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  6ca1bbb

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• Update unit tests

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  fe3d331

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• Merge remote-tracking branch 'abi/main' into stomach

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