feat: Add option to calculate Measurement per Mask component

[Czaki]

This PR adds the option to calculate Measurement Per each mask component.

[deprecated-napari-hub-preview-bot]

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[deprecated-napari-hub-preview-bot]

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[codecov]

Codecov Report

Merging #590 (034b55b) into develop (d519d3a) will increase coverage by 0.48%.
The diff coverage is 88.05%.

@@             Coverage Diff             @@
##           develop     #590      +/-   ##
===========================================
+ Coverage    80.59%   81.07%   +0.48%     
===========================================
  Files          143      143              
  Lines        19130    19148      +18     
===========================================
+ Hits         15417    15525     +108     
+ Misses        3713     3623      -90     

Impacted Files	Coverage Δ
...ckage/PartSeg/_roi_analysis/prepare_plan_widget.py	90.33% <25.00%> (ø)
package/PartSeg/_roi_analysis/advanced_window.py	65.21% <71.42%> (+12.42%)	⬆️
...lugins/napari_widgets/roi_extraction_algorithms.py	93.28% <80.00%> (ø)
package/PartSegCore/utils.py	93.54% <80.00%> (-0.25%)	⬇️
...rtSeg/plugins/napari_widgets/measurement_widget.py	79.27% <90.00%> (+2.21%)	⬆️
package/PartSeg/plugins/napari_widgets/utils.py	91.07% <100.00%> (ø)
package/PartSegCore/analysis/measurement_base.py	90.35% <100.00%> (+1.58%)	⬆️
...ge/PartSegCore/analysis/measurement_calculation.py	97.11% <100.00%> (+0.01%)	⬆️
...Core/analysis/batch_processing/parallel_backend.py	89.40% <0.00%> (-1.99%)	⬇️
... and 1 more

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[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590

[sourcery-ai]

Sourcery Code Quality Report

❌  Merging this PR will decrease code quality in the affected files by 0.32%.

Quality metrics	Before	After	Change
Complexity	2.70 ⭐	2.69 ⭐	-0.01 👍
Method Length	63.17 🙂	64.44 🙂	1.27 👎
Working memory	8.35 🙂	8.40 🙂	0.05 👎
Quality	70.68% 🙂	70.36% 🙂	-0.32% 👎

Other metrics	Before	After	Change
Lines	6931	7119	188

Changed files	Quality Before	Quality After	Quality Change
package/PartSeg/_roi_analysis/advanced_window.py	59.73% 🙂	59.69% 🙂	-0.04% 👎
package/PartSeg/_roi_analysis/prepare_plan_widget.py	71.41% 🙂	71.39% 🙂	-0.02% 👎
package/PartSeg/plugins/napari_widgets/measurement_widget.py	70.23% 🙂	70.32% 🙂	0.09% 👍
package/PartSeg/plugins/napari_widgets/roi_extraction_algorithms.py	72.64% 🙂	72.52% 🙂	-0.12% 👎
package/PartSeg/plugins/napari_widgets/utils.py	84.29% ⭐	84.52% ⭐	0.23% 👍
package/PartSegCore/utils.py	81.94% ⭐	82.05% ⭐	0.11% 👍
package/PartSegCore/analysis/measurement_base.py	78.72% ⭐	78.03% ⭐	-0.69% 👎
package/PartSegCore/analysis/measurement_calculation.py	73.48% 🙂	72.44% 🙂	-1.04% 👎
package/tests/test_PartSeg/test_napari_widgets.py	66.85% 🙂	67.44% 🙂	0.59% 👍
package/tests/test_PartSeg/roi_analysis/test_advanced_window.py	73.20% 🙂	72.01% 🙂	-1.19% 👎
package/tests/test_PartSegCore/test_measurements.py	70.84% 🙂	70.35% 🙂	-0.49% 👎

Here are some functions in these files that still need a tune-up:

File	Function	Complexity	Length	Working Memory	Quality	Recommendation
package/PartSegCore/analysis/measurement_calculation.py	MeasurementProfile.calculate_yield	14 🙂	272 ⛔	19 ⛔	29.41% 😞	Try splitting into smaller methods. Extract out complex expressions
package/PartSeg/_roi_analysis/prepare_plan_widget.py	PlanPreview.update_view	24 😞	236 ⛔	13 😞	30.27% 😞	Refactor to reduce nesting. Try splitting into smaller methods. Extract out complex expressions
package/PartSeg/_roi_analysis/advanced_window.py	MultipleInput.__init__	12 🙂	316 ⛔	16 ⛔	32.22% 😞	Try splitting into smaller methods. Extract out complex expressions
package/PartSeg/_roi_analysis/advanced_window.py	MeasurementSettings.__init__	1 ⭐	725 ⛔	26 ⛔	34.03% 😞	Try splitting into smaller methods. Extract out complex expressions
package/PartSeg/_roi_analysis/advanced_window.py	Properties.__init__	2 ⭐	502 ⛔	19 ⛔	36.60% 😞	Try splitting into smaller methods. Extract out complex expressions

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• 🙂 good
• 😞 poor
• ⛔ very poor

The 👍 and 👎 indicate whether the quality has improved or gotten worse with this pull request.

---

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[deprecated-napari-hub-preview-bot]

Preview page for your plugin is ready here:
https://preview.napari-hub.org/4DNucleome/PartSeg/590