Update bundle dependencies.

4DNucleome · Jul 18, 2024 · b29798d · b29798d
1 parent aac66a7
commit b29798d
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Showing 11 changed files with 108 additions and 133 deletions.
diff --git a/requirements/constraints_py3.10.txt b/requirements/constraints_py3.10.txt
@@ -41,7 +41,7 @@ cloudpickle==3.0.0
     # via dask
 comm==0.2.2
     # via ipykernel
-coverage==7.5.4
+coverage==7.6.0
     # via partseg (pyproject.toml)
 czifile==2019.7.2
     # via partseg (pyproject.toml)
@@ -59,7 +59,7 @@ docutils==0.21.2
     # via sphinx
 et-xmlfile==1.1.0
     # via openpyxl
-exceptiongroup==1.2.1
+exceptiongroup==1.2.2
     # via
     #   ipython
     #   pytest
@@ -151,7 +151,7 @@ magicgui==0.8.3
     # via
     #   partseg (pyproject.toml)
     #   napari
-mahotas==1.4.15
+mahotas==1.4.18
     # via partseg (pyproject.toml)
 markdown-it-py==3.0.0
     # via rich
@@ -183,7 +183,7 @@ npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.4
+numpy==2.0.0
     # via
     #   partseg (pyproject.toml)
     #   czifile
@@ -243,7 +243,7 @@ pillow==10.4.0
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24.1
+pint==0.24.3
     # via napari
 platformdirs==4.2.2
     # via
@@ -300,15 +300,13 @@ pyinstaller-hooks-contrib==2024.7
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
-pyopengl-accelerate==3.1.7
-    # via partseg (pyproject.toml)
 pyproject-hooks==1.1.0
     # via build
 pyqt6==6.7.0
     # via partseg (pyproject.toml)
 pyqt6-qt6==6.7.2
     # via pyqt6
-pyqt6-sip==13.6.0
+pyqt6-sip==13.8.0
     # via pyqt6
 pyside2==5.15.2.1
     # via
@@ -391,11 +389,11 @@ scipy==1.14.0
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.9.0
+sentry-sdk==2.10.0
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-setuptools==70.3.0
+setuptools==71.0.1
     # via
     #   pyinstaller
     #   pyinstaller-hooks-contrib
@@ -417,7 +415,7 @@ six==1.16.0
     #   python-dateutil
 snowballstemmer==2.2.0
     # via sphinx
-sphinx==7.3.7
+sphinx==7.4.5
     # via numpydoc
 sphinxcontrib-applehelp==1.0.8
     # via sphinx

diff --git a/requirements/constraints_py3.10_pydantic_1.txt b/requirements/constraints_py3.10_pydantic_1.txt
@@ -39,7 +39,7 @@ cloudpickle==3.0.0
     # via dask
 comm==0.2.2
     # via ipykernel
-coverage==7.5.4
+coverage==7.6.0
     # via partseg (pyproject.toml)
 czifile==2019.7.2
     # via partseg (pyproject.toml)
@@ -57,7 +57,7 @@ docutils==0.21.2
     # via sphinx
 et-xmlfile==1.1.0
     # via openpyxl
-exceptiongroup==1.2.1
+exceptiongroup==1.2.2
     # via
     #   ipython
     #   pytest
@@ -149,7 +149,7 @@ magicgui==0.8.3
     # via
     #   partseg (pyproject.toml)
     #   napari
-mahotas==1.4.15
+mahotas==1.4.18
     # via partseg (pyproject.toml)
 markdown-it-py==3.0.0
     # via rich
@@ -181,7 +181,7 @@ npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.4
+numpy==2.0.0
     # via
     #   partseg (pyproject.toml)
     #   czifile
@@ -241,7 +241,7 @@ pillow==10.4.0
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24.1
+pint==0.24.3
     # via napari
 platformdirs==4.2.2
     # via
@@ -297,15 +297,13 @@ pyinstaller-hooks-contrib==2024.7
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
-pyopengl-accelerate==3.1.7
-    # via partseg (pyproject.toml)
 pyproject-hooks==1.1.0
     # via build
 pyqt6==6.7.0
     # via partseg (pyproject.toml)
 pyqt6-qt6==6.7.2
     # via pyqt6
-pyqt6-sip==13.6.0
+pyqt6-sip==13.8.0
     # via pyqt6
 pyside2==5.15.2.1
     # via
@@ -388,11 +386,11 @@ scipy==1.14.0
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.9.0
+sentry-sdk==2.10.0
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-setuptools==70.3.0
+setuptools==71.0.1
     # via
     #   pyinstaller
     #   pyinstaller-hooks-contrib
@@ -414,7 +412,7 @@ six==1.16.0
     #   python-dateutil
 snowballstemmer==2.2.0
     # via sphinx
-sphinx==7.3.7
+sphinx==7.4.5
     # via numpydoc
 sphinxcontrib-applehelp==1.0.8
     # via sphinx

diff --git a/requirements/constraints_py3.11.txt b/requirements/constraints_py3.11.txt
@@ -41,7 +41,7 @@ cloudpickle==3.0.0
     # via dask
 comm==0.2.2
     # via ipykernel
-coverage==7.5.4
+coverage==7.6.0
     # via partseg (pyproject.toml)
 czifile==2019.7.2
     # via partseg (pyproject.toml)
@@ -145,7 +145,7 @@ magicgui==0.8.3
     # via
     #   partseg (pyproject.toml)
     #   napari
-mahotas==1.4.15
+mahotas==1.4.18
     # via partseg (pyproject.toml)
 markdown-it-py==3.0.0
     # via rich
@@ -177,7 +177,7 @@ npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.4
+numpy==2.0.0
     # via
     #   partseg (pyproject.toml)
     #   czifile
@@ -237,7 +237,7 @@ pillow==10.4.0
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24.1
+pint==0.24.3
     # via napari
 platformdirs==4.2.2
     # via
@@ -294,15 +294,13 @@ pyinstaller-hooks-contrib==2024.7
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
-pyopengl-accelerate==3.1.7
-    # via partseg (pyproject.toml)
 pyproject-hooks==1.1.0
     # via build
 pyqt6==6.7.0
     # via partseg (pyproject.toml)
 pyqt6-qt6==6.7.2
     # via pyqt6
-pyqt6-sip==13.6.0
+pyqt6-sip==13.8.0
     # via pyqt6
 pyside2==5.13.2
     # via
@@ -385,11 +383,11 @@ scipy==1.14.0
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.9.0
+sentry-sdk==2.10.0
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-setuptools==70.3.0
+setuptools==71.0.1
     # via
     #   pyinstaller
     #   pyinstaller-hooks-contrib
@@ -411,7 +409,7 @@ six==1.16.0
     #   python-dateutil
 snowballstemmer==2.2.0
     # via sphinx
-sphinx==7.3.7
+sphinx==7.4.5
     # via numpydoc
 sphinxcontrib-applehelp==1.0.8
     # via sphinx

diff --git a/requirements/constraints_py3.11_docs.txt b/requirements/constraints_py3.11_docs.txt
@@ -137,7 +137,7 @@ magicgui==0.8.3
     # via
     #   partseg (pyproject.toml)
     #   napari
-mahotas==1.4.15
+mahotas==1.4.18
     # via partseg (pyproject.toml)
 markdown-it-py==3.0.0
     # via rich
@@ -169,7 +169,7 @@ npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.4
+numpy==2.0.0
     # via
     #   partseg (pyproject.toml)
     #   czifile
@@ -226,7 +226,7 @@ pillow==10.4.0
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24.1
+pint==0.24.3
     # via napari
 platformdirs==4.2.2
     # via
@@ -285,7 +285,7 @@ pyqt6==6.7.0
     # via partseg (pyproject.toml)
 pyqt6-qt6==6.7.2
     # via pyqt6
-pyqt6-sip==13.6.0
+pyqt6-sip==13.8.0
     # via pyqt6
 pyside2==5.13.2
     # via -r requirements/version_denylist.txt
@@ -355,7 +355,7 @@ scipy==1.14.0
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.9.0
+sentry-sdk==2.10.0
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
@@ -377,14 +377,14 @@ six==1.16.0
     #   python-dateutil
 snowballstemmer==2.2.0
     # via sphinx
-sphinx==7.3.7
+sphinx==7.4.5
     # via
     #   partseg (pyproject.toml)
     #   autodoc-pydantic
     #   numpydoc
     #   sphinx-autodoc-typehints
     #   sphinx-qt-documentation
-sphinx-autodoc-typehints==2.2.2
+sphinx-autodoc-typehints==2.2.3
     # via partseg (pyproject.toml)
 sphinx-qt-documentation==0.4.1
     # via partseg (pyproject.toml)

diff --git a/requirements/constraints_py3.11_pydantic_1.txt b/requirements/constraints_py3.11_pydantic_1.txt
@@ -39,7 +39,7 @@ cloudpickle==3.0.0
     # via dask
 comm==0.2.2
     # via ipykernel
-coverage==7.5.4
+coverage==7.6.0
     # via partseg (pyproject.toml)
 czifile==2019.7.2
     # via partseg (pyproject.toml)
@@ -143,7 +143,7 @@ magicgui==0.8.3
     # via
     #   partseg (pyproject.toml)
     #   napari
-mahotas==1.4.15
+mahotas==1.4.18
     # via partseg (pyproject.toml)
 markdown-it-py==3.0.0
     # via rich
@@ -175,7 +175,7 @@ npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
-numpy==1.26.4
+numpy==2.0.0
     # via
     #   partseg (pyproject.toml)
     #   czifile
@@ -235,7 +235,7 @@ pillow==10.4.0
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24.1
+pint==0.24.3
     # via napari
 platformdirs==4.2.2
     # via
@@ -291,15 +291,13 @@ pyinstaller-hooks-contrib==2024.7
     # via pyinstaller
 pyopengl==3.1.7
     # via napari
-pyopengl-accelerate==3.1.7
-    # via partseg (pyproject.toml)
 pyproject-hooks==1.1.0
     # via build
 pyqt6==6.7.0
     # via partseg (pyproject.toml)
 pyqt6-qt6==6.7.2
     # via pyqt6
-pyqt6-sip==13.6.0
+pyqt6-sip==13.8.0
     # via pyqt6
 pyside2==5.13.2
     # via
@@ -382,11 +380,11 @@ scipy==1.14.0
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.9.0
+sentry-sdk==2.10.0
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-setuptools==70.3.0
+setuptools==71.0.1
     # via
     #   pyinstaller
     #   pyinstaller-hooks-contrib
@@ -408,7 +406,7 @@ six==1.16.0
     #   python-dateutil
 snowballstemmer==2.2.0
     # via sphinx
-sphinx==7.3.7
+sphinx==7.4.5
     # via numpydoc
 sphinxcontrib-applehelp==1.0.8
     # via sphinx