Biomedical Text Annotation

Custom Annotation system that was used to investigate the effect of gamification on motivating human annotator engagment for crowdsourcing purposes

Source code outline:

• Game: collection of c# scripts that handle the game logic. Main ones are:
  • "NLPOrgs.cs": Converts hidden model guesses into string locations
  • "Loader.cs": Handles how trap questions vs clean questions are loaded
  • "Points.cs": Handles how points are allocated to users
  • "TMPDetector.cs": Handles user input for annotation
  • "NLP.cs": Handles ner hidden model and pos tagger
  • "NERTrainer.cs": Trains the NER to work on diseases
  • "SendData.cs": Handles sending users responses to google forms
• Data preparation: "Format converter.ipynb"
• Data processing: "Graphs.ipynb"

To play prototype:

• https://2373655r.itch.io/biomedical-text-annotation

To play with .exe:

• Click Indv Project Prototype.exe

To build enviroment:

• Install Github for Unity
• Fork from https://github.com/2373655r/Diss.git
• Press play in inspector or file -> build settings -> build

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