Control stack guard page temporarily disabled - pgloader issue when migrating from Postgres to YSQL

[lakshman-battini]

Jira Link: DB-490
Hello, am getting 'Control stack guard page temporarily disabled' issue when migrating Postgres database to YSQL using pgloader. Below is the debug error log.

The schema in source database is very trivial, only one table in public schema with 5 rows. Tried migrating from postgres to postgres instance, it is working fine. The issue is when migrating from postgres to Yugabyte YSQL API.

2020-02-24T03:18:45.219000-05:00 NOTICE Prepare PostgreSQL database.
2020-02-24T03:18:45.613000-05:00 DEBUG CONNECTED TO #<PGLOADER.PGSQL:PGSQL-CONNECTION pgsql://postgres@<yb_tserver>:5433/migration {100639EE33}>
2020-02-24T03:18:45.613000-05:00 DEBUG SET client_encoding TO 'utf8'
2020-02-24T03:18:45.760000-05:00 DEBUG SET application_name TO 'pgloader'
2020-02-24T03:18:46.179000-05:00 DEBUG BEGIN
KABOOM!
INFO: Control stack guard page unprotected
Control stack guard page temporarily disabled: proceed with caution
2020-02-24T03:18:46.877000-05:00 INFO Stopping monitor

What I am doing here?

Control stack exhausted (no more space for function call frames).
This is probably due to heavily nested or infinitely recursive function
calls, or a tail call that SBCL cannot or has not optimized away.

PROCEED WITH CAUTION.

Pgloader load file:

load database
  from pgsql://<username>:<password>@localhost:5432/test
  into pgsql://<username>:<password>@<yb-tserver>:5433/migration
;

pgloader version:

pgloader version "3.6.1"
compiled with SBCL 1.4.0-1.el7

Tried with multiple pgloader versions, 3.6.1, 3.6.0 and 3.5.2. But still no luck.

YSQL version:
11.2-YB-2.0.6.0-b0

[ddorian]

For some reason my pgloader can't connect to my postgresql so I replicated with mysql.

1. docker run --name my-mysql -e MYSQL_ROOT_PASSWORD=1 -d mysql:latest --default-authentication-plugin=mysql_native_password (user=root, password=1)
2. docker run --name my-phpmyadmin -d --link my-mysql:db -p 8081:80 phpmyadmin/phpmyadmin
3. create an empty database comm on mysql (127.0.0.1:8081 for phpmyadmin) and an empty database comm on ysql
4. docker pull dimitri/pgloader
5. get the ip of my-mysql container
6. docker run --rm --net="host" --name pgloader dimitri/pgloader:latest pgloader --debug mysql://root:[email protected]/comm postgresql://yugabyte:[email protected]:5433/comm
7. the error persists even after you create schema comm;
8. In postgresql 11 it works
   pgloader_pg11.txt

$ docker run --rm --net="host" --name pgloader dimitri/pgloader:latest pgloader --debug mysql://root:[email protected]/comm postgresql://yugabyte:[email protected]:5433/dorian_comm
mkdir -p #P"/tmp/pgloader/"
pgloader version 3.6.2~devel
compiled with SBCL 1.4.16.debian
sb-impl::*default-external-format* :ANSI_X3.4-1968
tmpdir: #P"/tmp/pgloader/"
2020-02-27T14:14:58.007000Z NOTICE Starting pgloader, log system is ready.
2020-02-27T14:14:58.012000Z INFO Starting monitor
2020-02-27T14:14:58.013000Z LOG pgloader version "3.6.2~devel"
2020-02-27T14:14:58.013000Z INFO     SOURCE: "mysql://root:[email protected]/comm"
2020-02-27T14:14:58.014000Z INFO SOURCE URI: #<PGLOADER.SOURCE.MYSQL:MYSQL-CONNECTION mysql://[email protected]:3306/comm {1005EA5523}>
2020-02-27T14:14:58.014000Z INFO     TARGET: "postgresql://yugabyte:[email protected]:5433/dorian_comm"
2020-02-27T14:14:58.014000Z INFO TARGET URI: #<PGLOADER.PGSQL:PGSQL-CONNECTION pgsql://[email protected]:5433/dorian_comm {1005FEF9B3}>
2020-02-27T14:14:58.014000Z DEBUG LOAD DATA FROM #<PGLOADER.SOURCE.MYSQL:MYSQL-CONNECTION mysql://[email protected]:3306/comm {1005EA5523}>
2020-02-27T14:14:58.038000Z DEBUG CONNECTED TO #<PGLOADER.PGSQL:PGSQL-CONNECTION pgsql://[email protected]:5433/dorian_comm {1005FEF9B3}>
2020-02-27T14:14:58.038000Z DEBUG SET client_encoding TO 'utf8'
2020-02-27T14:14:58.041000Z DEBUG SET application_name TO 'pgloader'
2020-02-27T14:14:58.070000Z LOG Migrating from #<MYSQL-CONNECTION mysql://[email protected]:3306/comm {1005EA5523}>
2020-02-27T14:14:58.070000Z LOG Migrating into #<PGSQL-CONNECTION pgsql://[email protected]:5433/dorian_comm {1005FEF9B3}>
2020-02-27T14:14:58.096000Z DEBUG CONNECTED TO #<MYSQL-CONNECTION mysql://[email protected]:3306/comm {1005EA5523}>
2020-02-27T14:14:58.100000Z SQL MySQL: sending query: -- params: db-name
--         table-type-name
--         only-tables
--         only-tables
--         including
--         filter-list-to-where-clause incuding
--         excluding
--         filter-list-to-where-clause excluding
  select c.table_name, t.table_comment,
         c.column_name, c.column_comment,
         c.data_type, c.column_type, c.column_default,
         c.is_nullable, c.extra
    from information_schema.columns c
         join information_schema.tables t using(table_schema, table_name)
   where c.table_schema = 'comm' and t.table_type = 'BASE TABLE'
         
         
order by table_name, ordinal_position;
2020-02-27T14:14:58.103000Z SQL MySQL: sending query: -- params: db-name
--         table-type-name
--         only-tables
--         only-tables
--         including
--         filter-list-to-where-clause incuding
--         excluding
--         filter-list-to-where-clause excluding
SELECT s.table_name, s.constraint_name, s.ft, s.cols, s.fcols,
       rc.update_rule, rc.delete_rule

FROM
 (
  SELECT tc.table_schema, tc.table_name,
         tc.constraint_name, k.referenced_table_name ft,

             group_concat(         k.column_name
                          order by k.ordinal_position) as cols,

             group_concat(         k.referenced_column_name
                          order by k.position_in_unique_constraint) as fcols

        FROM information_schema.table_constraints tc

        LEFT JOIN information_schema.key_column_usage k
               ON k.table_schema = tc.table_schema
              AND k.table_name = tc.table_name
              AND k.constraint_name = tc.constraint_name

      WHERE     tc.table_schema = 'comm'
            AND k.referenced_table_schema = 'comm'
            AND tc.constraint_type = 'FOREIGN KEY'
           
           

   GROUP BY tc.table_schema, tc.table_name, tc.constraint_name, ft
 ) s
             JOIN information_schema.referential_constraints rc
               ON rc.constraint_schema = s.table_schema
              AND rc.constraint_name = s.constraint_name
              AND rc.table_name = s.table_name;
2020-02-27T14:14:58.108000Z SQL MySQL: sending query: -- params: db-name
--         table-type-name
--         only-tables
--         only-tables
--         including
--         filter-list-to-where-clause incuding
--         excluding
--         filter-list-to-where-clause excluding
  SELECT table_name, index_name, index_type,
         sum(non_unique),
         cast(GROUP_CONCAT(column_name order by seq_in_index) as char)
    FROM information_schema.statistics
   WHERE table_schema = 'comm'
         
         
GROUP BY table_name, index_name, index_type;
2020-02-27T14:14:58.121000Z INFO Processing source catalogs
2020-02-27T14:14:58.127000Z NOTICE Prepare PostgreSQL database.
2020-02-27T14:14:58.144000Z DEBUG CONNECTED TO #<PGLOADER.PGSQL:PGSQL-CONNECTION pgsql://[email protected]:5433/dorian_comm {1005FEF9B3}>
2020-02-27T14:14:58.144000Z DEBUG SET client_encoding TO 'utf8'
2020-02-27T14:14:58.146000Z DEBUG SET application_name TO 'pgloader'
2020-02-27T14:14:58.152000Z DEBUG BEGIN
KABOOM!
INFO: Control stack guard page unprotected
Control stack guard page temporarily disabled: proceed with caution
2020-02-27T14:14:58.369000Z INFO Stopping monitor

What I am doing here?

Control stack exhausted (no more space for function call frames).
This is probably due to heavily nested or infinitely recursive function
calls, or a tail call that SBCL cannot or has not optimized away.

PROCEED WITH CAUTION.

[ddorian]

For some reason I didn't get a core dump. Assigning since that's all I could see.

[danports]

Hi guys, I haven't tried to track it down, but in my experience there are issues with the dimitri/pgloader:latest image - try dimitri/pgloader:ccl.latest instead. With that image, I was able to get further with pgloader (at least until I ran into the lack of support for SAVEPOINT - #1125).

[ddorian]

ysql_loader is a fork of pgloader and works with yugabytedb:

1. https://blog.yugabyte.com/migrating-mysql-to-yugabytedb-using-pgloader/
2. https://github.com/yugabyte/pgloader
3. https://docs.yugabyte.com/preview/integrations/ysql-loader/