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Order of enrichment in the gsea plot #28

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apal6 opened this issue Aug 23, 2023 · 0 comments
Open

Order of enrichment in the gsea plot #28

apal6 opened this issue Aug 23, 2023 · 0 comments

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@apal6
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apal6 commented Aug 23, 2023

Hi,

Thank you for the wonderful package.
I have got this plot for two conditions that I am comparing (untreated and treated). I wonder what is the order of this enrichment? It shows that different pathways are enriched in different clusters but when we are trying to look at the effects of treatment, I expect different pathways if the drug is causing any change. Any thoughts?

Screenshot 2023-08-23 at 10 41 22 AM

Thank you!

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