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pass the reduction to plot_scdata? #17

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zpingfeng opened this issue Nov 19, 2021 · 0 comments
Open

pass the reduction to plot_scdata? #17

zpingfeng opened this issue Nov 19, 2021 · 0 comments
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development questions regarding development

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@zpingfeng
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Please have a detailed description regarding the questions about package development
Thanks for the development of the Scillus package. It is easy to use and generate elegant figures.
However, I would like to plot tsne plot, and the plot_scdata plots umap in default. In seurat, I can plot tsne with DimPlot(seu.obj,reduction="tsne",split.by="sample"). I have tried to input DimReduc="tsne" or eductions="tsne" in the plot_scdata, it showed unused argument (DimReduc = "tsne") or unused argument (reductions = "tsne"). Is there a way I can plot tsne using scillus ?

@zpingfeng zpingfeng added the development questions regarding development label Nov 19, 2021
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