environment.yml

name: mda-user-guide
channels:
  - conda-forge
  - defaults
dependencies:
  - cython
  - distributed==2021.1.0
  - dask==2021.1.0
  - python-graphviz
  - pytest
  - decorator
  - docutils
  - graphviz
  - ipywidgets<8.0.0
  - ipython
  - ipygany
  - jedi
  - jinja2
  - jupyter_contrib_nbextensions
  - matplotlib
  - nbclient
  - nbconvert
  - nbformat
  - nbsphinx
  - networkx
  - nglview
  - notebook
  - numpy
  - packaging
  - parso
  - pip
  - plotly
  - pybtex
  - python
  - pyvista
  - scikit-image
  - scikit-learn>=1.1.2
  - sphinx
  - sphinxcontrib-bibtex
  - sphinx_rtd_theme
  - threadpoolctl
  - tabulate
  - widgetsnbextension
  - ipycytoscape>=1.3.0
  - seaborn>=0.12.1
  - openmm>=7.0.0
  - pandoc
  - moviepy
  - ipyvtklink
  - pip:
      - msmb_theme
      - sphinx-sitemap
      - nbval==0.9.6
      - pyedr>=0.7
      - git+https://github.com/ParmEd/ParmEd.git@7f837a0c0010299f24edce8240514c546944c458
      - git+https://github.com/MDAnalysis/mdanalysis@develop#egg=mdanalysis&subdirectory=package
      - git+https://github.com/MDAnalysis/mdanalysis@develop#egg=MDAnalysisTests&subdirectory=testsuite
      - git+https://github.com/MDAnalysis/MDAnalysisData@master#egg=MDAnalysisData