forked from SimVascular/simvascular.github.io-archive
-
Notifications
You must be signed in to change notification settings - Fork 0
/
index.html
856 lines (748 loc) · 45.8 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<meta name="author" content="">
<title>SimVascular</title>
<link href="css/bootstrap.css" rel="stylesheet" type="text/css" /><link href="css/bootstrap-select.min.css" rel="stylesheet" type="text/css" /><link href="css/grayscale.css" rel="stylesheet" type="text/css" />
<link rel="shortcut icon" href="img/favicon.ico">
<!-- Custom Fonts -->
<link href="font-awesome-4.1.0/css/font-awesome.min.css" rel="stylesheet" type="text/css">
<link href="http://fonts.googleapis.com/css?family=Lora:400,700,400italic,700italic" rel="stylesheet" type="text/css">
<link href="http://fonts.googleapis.com/css?family=Montserrat:400,700" rel="stylesheet" type="text/css">
<link href="//vjs.zencdn.net/4.8/video-js.css" rel="stylesheet">
<!-- HTML5 Shim and Respond.js IE8 support of HTML5 elements and media queries -->
<!-- WARNING: Respond.js doesn't work if you view the page via file:// -->
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/libs/html5shiv/3.7.0/html5shiv.js"></script>
<script src="https://oss.maxcdn.com/libs/respond.js/1.4.2/respond.min.js"></script>
<![endif]-->
</head>
<body id="page-top" data-spy="scroll" data-target=".navbar-fixed-top">
<!-- FB STUFF -->
<div id="fb-root"></div>
<script>(function(d, s, id) {
var js, fjs = d.getElementsByTagName(s)[0];
if (d.getElementById(id)) return;
js = d.createElement(s); js.id = id;
js.src = "//connect.facebook.net/en_US/sdk.js#xfbml=1&version=v2.0";
fjs.parentNode.insertBefore(js, fjs);
}(document, 'script', 'facebook-jssdk'));
</script>
<!-- Navigation -->
<nav class="navbar navbar-custom navbar-fixed-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".navbar-main-collapse">
<i class="fa fa-bars"></i>
</button>
<a class="navbar-brand page-scroll" href="#page-top">
<img src="img/svlogo/svLogoSmallText.png" alt="..." >
</a>
</div>
<!-- Collect the nav links, forms, and other content for toggling -->
<div class="collapse navbar-collapse navbar-right navbar-main-collapse">
<ul class="nav navbar-nav">
<!-- Hidden li included to remove active class from about link when scrolled up past about section -->
<li class="hidden">
<a href="#page-top"></a>
</li>
<li>
<a class="page-scroll" href="#page-top">Home</a>
</li>
<li>
<a class="page-scroll" href="#gallery">Gallery</a>
</li>
<li>
<a class="page-scroll" href="#download">Download</a>
</li>
<li>
<a class="page-scroll" href="#docs">Documentation</a>
</li>
<li>
<a class="page-scroll" href="#onlinetutorials">Online Tutorials</a>
</li>
<li>
<a class="page-scroll" href="#repository">Repository</a>
</li>
<li>
<a class="page-scroll" href="#team">Team</a>
</li>
<li>
<a class="page-scroll" href="#workshops">Workshops</a>
</li>
<li>
<a class="page-scroll" href="#contact">Contact</a>
</li>
</ul>
</div>
<!-- /.navbar-collapse -->
</div>
<!-- /.container -->
</nav>
<!-- Intro Header -->
<header class="intro">
<div class="intro-body">
<div class="container content-section text-center">
<div class="row">
<div class="col-lg-9 top-buffer">
<img id="svLogoTitle" src="img/svlogo/svLogoTitle.png" alt="..." >
<p class="intro-text top-buffer">The only fully opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.</p>
<br>
<br>
<br>
<br>
<br>
<br>
<br>
<br>
<br>
<div>
<img id="svLogoTitle" src="img/logos/stanfordmedicine.png" style="float: left; margin-left: 25px; margin-right: 25px; height:50px; width:150px;" alt="..." >
<img id="svLogoTitle" src="img/logos/ucberkeley.png" style="float: left; margin-right: 25px; height:50px; width:150px;" alt="..." >
<img id="svLogoTitle" src="img/logos/osmsc.png" style="float: left; margin-right: 25px; height:50px; width:150px;" alt="..." >
<img id="svLogoTitle" src="img/logos/nsf.jpg" style="float: left; margin-right: 25px; height:50px; width:50px;" alt="..." >
<img id="svLogoTitle" src="img/logos/simtk.png" style="float: left; height:45px; width:160px;" alt="..." >
</div>
</div>
<!-- LOGOS AND TWITTER -->
<div class="col-lg-3 top-buffer text-center top-buffer">
<div class="col-xs-12 col-sm-12 col-md-12 col-lg-12 top-buffer-small text-left">
<a href="https://www.facebook.com/groups/835227759855853/"><img class="media-object" src="img/logos/fb.png" style="float: left; margin-right: 5px; height:35px;" alt="..."></a>
<!--
<img class="media-object" src="img/logos/gp.png" style="float: left; margin-right: 5px; height:35px;" alt="...">
<img class="media-object" src="img/logos/linkedin.png" style="float: left; margin-right: 5px; height:35px;" alt="...">
-->
<a href="https://www.youtube.com/channel/UCT61XgTRqpfb39Hyio9IqGQ"><img class="media-object" src="img/logos/ut.png" style="float: left; margin-right: 5px; height:35px;" alt=""></a>
</div>
<!-- TWITTER TIMELINE -->
<div class="col-xs-12 col-sm-12 col-md-12 col-lg-12 text-left top-buffer-small">
<a class="twitter-timeline" href="https://twitter.com/simvascular" data-widget-id="514211820307886080">Tweets by @simvascular</a>
</div>
<!-- FB/GP LIKE BUTTONS -->
<div class="col-xs-12 col-sm-12 col-md-12 col-lg-12 top-buffer-small text-left bottom-buffer-small">
<div class="g-plusone"></div>
<div class="fb-like" data-href="https://developers.facebook.com/docs/plugins/" data-layout="button_count" data-action="like" data-show-faces="true" data-share="true"></div>
</div>
</div>
</div>
</div>
</div>
</header>
<!-- Contact Section -->
<section id="gallery" class="container content-section text-left">
<div class="row">
<div class="col-lg-7 text-left top-buffer">
<h2>Gallery</h2>
<h4>Picture Gallery</h4>
<div id="carousel-example-generic" class="carousel slide" data-ride="carousel">
<!-- Indicators -->
<ol class="carousel-indicators">
<li data-target="#carousel-example-generic" data-slide-to="0" class="active"></li>
<li data-target="#carousel-example-generic" data-slide-to="1"></li>
<li data-target="#carousel-example-generic" data-slide-to="2"></li>
<li data-target="#carousel-example-generic" data-slide-to="3"></li>
</ol>
<!-- Wrapper for slides -->
<div class="carousel-inner">
<div class="item active">
<img src="img/gallery/Img_Gallery_01.png" alt="...">
<div class="carousel-caption">
<h5>Blood flow in CABG simulation</h5>
</div>
</div>
<div class="item">
<img src="img/gallery/Img_Gallery_02.png" alt="...">
<div class="carousel-caption">
<h5>Blood velocity distribution in CABG simulation</h5>
</div>
</div>
<div class="item">
<img src="img/gallery/Img_Gallery_03.png" alt="...">
<div class="carousel-caption">
<h5>Blood velocity in coronary aneurism</h5>
</div>
</div>
<div class="item">
<img src="img/gallery/Img_Gallery_04.png" alt="...">
<div class="carousel-caption">
<h5>hemi-Fontan cavopulmonary connection</h5>
</div>
</div>
</div>
<!-- Controls -->
<a class="left carousel-control" href="#carousel-example-generic" role="button" data-slide="prev">
<span class="glyphicon glyphicon-chevron-left"></span>
</a>
<a class="right carousel-control" href="#carousel-example-generic" role="button" data-slide="next">
<span class="glyphicon glyphicon-chevron-right"></span>
</a>
</div>
</div>
<div class="col-lg-5 text-left top-buffer">
<h4>Animation Gallery</h4>
<video loop id="div_video" class="video-js vjs-default-skin align-centre" controls preload="none"
poster="img/gallery/ani_CABG.png"
width="640" height="264"
data-setup="{}">
<source src="img/gallery/ani_CABG.mp4" type="video/mp4">
<source src="img/gallery/ani_CABG.ogg" type="video/ogg">
<source src="img/gallery/ani_CABG.webm" type="video/webm">
<p class="vjs-no-js">To view this video please enable JavaScript, and consider upgrading to a web browser that <a href="http://videojs.com/html5-video-support/" target="_blank">supports HTML5 video</a></p>
</video>
<h6>Choose Video</h6>
<div class="col-xs-3 col-md-3 col-lg-3">
<a id="CABG" class="thumbnail thumBlack">
<img src="img/gallery/thumb_CABG.png" alt="...">
</a>
</div>
<div class="col-xs-3 col-md-3 col-lg-3">
<a id="SHUNT" class="thumbnail thumBlack">
<img src="img/gallery/thumb_SHUNT.png" alt="...">
</a>
</div>
<div class="col-xs-3 col-md-3 col-lg-3">
<a id="YGRAFT" class="thumbnail thumBlack">
<img src="img/gallery/thumb_YGRAFT.png" alt="...">
</a>
</div>
<div class="col-xs-12 col-md-12 col-lg-12">
<h5><a href ="https://www.youtube.com/channel/UCT61XgTRqpfb39Hyio9IqGQ">Follow us on youtube...</a></h5>
</div>
</div>
</div>
</section>
<!-- Download Section -->
<section id="download" class="content-section text-center">
<!-- Download Instructions -->
<div class="row">
<div class="col-lg-12">
<h2>Download SimVascular</h2>
<!-- Choose OS and RELEASE -->
<!-- <label for="OS" class="control-label"><h5>OS</h5></label>
<select class="selectpicker" id="OS" data-style="btn-primary">
<option>Windows</option>
<option>Linux</option>
<option>Mac OSX</option>
</select>
<label for="version" class="control-label"><h5>Release</h5></label>
<select class="selectpicker" id="version" data-style="btn-primary">
<option value="19">1.9</option>
<option value="20">2.0</option>
<option value="21">2.1</option>
</select>-->
<div class="col-lg-12">
<h4><span class="glyphicon glyphicon-user"></span> Users: download installer packages</h4>
<div class="form-group">
<a href="https://simtk.org/project/xml/downloads.xml?group_id=188" class="btn btn-info" role="button">Download Installation Package</a>
</div>
<div class="form-group">
<a href="https://simtk.org/projects/sv_tests" class="btn btn-info" role="button">Download Example Projects</a>
</div>
</div>
<div class="col-lg-12 top-buffer">
<h4><span class="glyphicon glyphicon-cog"></span> Developers: visit our source code repository</h4>
<div class="form-group">
<a href="https://github.com/SimVascular/SimVascular" class="btn btn-info" role="button">Source Code Repository</a>
</div>
</div>
</div>
</div>
<!-- Licence -->
<div class="row">
<!-- Column Space -->
<div class="col-xs-1 col-lg-3">
</div>
<!-- Description -->
<div class="col-xs-10 col-lg-6 top-buffer">
<div class="media">
<h4 class="media-heading centerTitleText"><a class="expander" href="#">License Terms</a></h4>
<div class="media-body">
<div class="content BioPar justifiedText">
<h6 class="media-heading text-Left top-buffer">SimVascular components svModel, svMesh, svPre, and svPost are provided under the full BSD license subject to the terms below:</h6>
<p class="LegalStuff">
Copyright © 1998-2007 Stanford University, Charles Taylor, Nathan Wilson, Ken Wang. See SimVascular Acknowledgements file for additional contributors to the source code.
<br>
<br>
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
<br>
<br>
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
<br>
<br>
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
</p>
<h6 class="media-heading text-Left">The SimVascular solver, including svSolver and svLS, is provided under a modified BSD-license subject to the permissions below:</h6>
<p class="LegalStuff">
This software is Copyright © 2014 The Regents of the University of California. All Rights Reserved.
Permission to copy, modify, and distribute this software and its documentation for educational, research and non-profit purposes, without fee, and without a written agreement is hereby granted, provided that the above copyright notice, this paragraph and the following three paragraphs appear in all copies.
<br>
<br>
Permission to make commercial use of this software may be obtained by contacting:
<br>
<br>
Technology Transfer Office<br>
9500 Gilman Drive, Mail Code 0910<br>
University of California<br>
La Jolla, CA 92093-0910<br>
(858) 534-5815<br>
<br>
<br>
This software program and documentation are copyrighted by The Regents of the University of California. The software program and documentation are supplied "as is", without any accompanying services from The Regents. The Regents does not warrant that the operation of the program will be uninterrupted or error-free. The end-user understands that the program was developed for research purposes and is advised not to rely exclusively on the program for any reason.
<br>
<br>
IN NO EVENT SHALL THE UNIVERSITY OF CALIFORNIA BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST PROFITS, ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF THE UNIVERSITY OF CALIFORNIA HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. THE UNIVERSITY OF CALIFORNIA SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE SOFTWARE PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, AND THE UNIVERSITY OF CALIFORNIA HAS NO OBLIGATIONS TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR MODIFICATIONS.
</p>
<h6 class="media-heading text-Left">Licensing terms for external open source packages</h6>
<p class="LegalStuff">
ITK: <a href="http://www.itk.org/ITK/project/license.html">http://www.itk.org/ITK/project/license.html</a><br>
VTK: <a href="http://www.vtk.org/VTK/project/license.html">http://www.vtk.org/VTK/project/license.html</a><br>
Tetgen: <a href="http://wias-berlin.de/software/tetgen/1.5/agpl-3.0-standalone.html">http://wias-berlin.de/software/tetgen/1.5/agpl-3.0-standalone.html</a><br>
</p>
<h6 class="media-heading text-Left">Commercial components</h6>
<p class="LegalStuff">
MeshSim users should contact simmetrix for licensing information.
</p>
<h6 class="media-heading text-Left">Additional license information</h6>
<p class="LegalStuff">
Please see the additional license information contained in the SimVascular source code.
</p>
</div>
</div>
</div>
</div>
</div>
</section>
<!-- Documentation Section -->
<section id="docs" class="container content-section text-left">
<div class="row">
<div class="col-lg-12">
<h2>SimVascular Documentation</h2>
<div class="row">
<!-- User Guides -->
<div class="col-xs-12 col-sm-6 col-md-6 col-lg-4 top-buffer">
<!-- Description -->
<div class="media">
<!-- <a class="pull-left" href="#">
<img class="media-object" src="img/Img_Docs_ModelBuild.png" alt="...">
</a> -->
<div class="centreDoc" style="height:100px;">
<img src="img/docs/header_img_07.png" alt="...">
</div><br>
<div class="media-body">
<h4 class="media-heading text-center">User Guides</h4><br>
<h6 class="media-heading text-center"><a href="https://github.com/SimVascular/SimVascular/wiki/wiki_for_users">Installing SimVascular</a></h6><br>
<h6 class="media-heading text-center"><a href="docsInstallation.html">Installing SV (outdated)</a></h6><br>
<h6 class="media-heading text-center"><a href="docsQuickGuide.html">Quick Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docsModelGuide.html">Modeling Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docsMeshing.html">Meshing Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docsFlowSolver.html">Simulation Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docssvFSI.html">svFSI Guide</a></h6><br />
<h6 class="media-heading text-center"><a href="docsROMSimulation.html">ROM Simulation Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docsGenBC.html">General B.C. Guide</a></h6><br>
<h6 class="media-heading text-center"><a href="docsPythonInterface.html">Python Interface</a></h6><br>
<h6 class="media-heading text-center"><a href="https://github.com/SimVascular/SimVascular/wiki/wiki_for_users">FAQ & Wiki</a></h6><br>
</div>
</div>
</div>
<!-- Clinical Test Cases -->
<div class="col-xs-12 col-sm-6 col-md-6 col-lg-4 top-buffer">
<!-- Description -->
<div class="media">
<!-- <a class="pull-left" href="#">
<img class="media-object" src="img/Img_About_Coro.png" alt="...">
</a> -->
<div class="centreDoc" style="height:100px;">
<img src="img/docs/header_img_03.png" alt="...">
</div><br>
<div class="media-body">
<h4 class="media-heading text-center">Clinical Case Studies</h4><br>
<h6 class="media-heading text-center"><a href="clinicalCase3.html">Coronary Normal</a></h6><br>
<h6 class="media-heading text-center"><a href="clinicalCase1.html">Aortofemoral Normal - 1</a></h6><br>
<h6 class="media-heading text-center"><a href="clinicalCase2.html">Aortofemoral Normal - 2</a></h6><br>
<h6 class="media-heading text-center"><a href="clinicalCase4.html">Healthy Pulmonary</a></h6>
</div>
</div>
</div>
<!-- Developer Guides -->
<div class="col-xs-12 col-sm-6 col-md-6 col-lg-4 top-buffer">
<!-- Description -->
<div class="media">
<!-- <a class="pull-left" href="#">
<img class="media-object" src="img/Img_About_Coro.png" alt="...">
</a> -->
<div class="centreDoc" style="height:100px;">
<img src="img/docs/header_img_08.png" alt="...">
</div><br>
<div class="media-body">
<h4 class="media-heading text-center">Developer Guides</h4><br>
<h6 class="media-heading text-center"><a href="https://github.com/SimVascular/SimVascular/wiki/wiki_for_developers">Compiling SV (Wiki)</a></h6><br>
</div>
</div>
</div>
<!-- SV Community -->
<!--<div class="col-xs-12 col-sm-6 col-md-6 col-lg-3 top-buffer">-->
<!-- Description -->
<!--<div class="media">-->
<!-- <a class="pull-left" href="#">
<img class="media-object" src="img/Img_About_Coro.png" alt="...">
</a> -->
<!--<div class="centreDoc" style="height:100px;">
<img src="img/docs/header_img_06.png" alt="...">
</div><br>
<div class="media-body">
<h4 class="media-heading text-center">svCommunity</h4><br>
<h6 class="media-heading"><a href="https://simtk.org/forums/viewforum.php?f=188">SimVascular Public Forum</a></h6>
Interact with other SimVascular users.<br><br>
<h6 class="media-heading"><a>News Mailing List</a></h6>
<h6 class="media-heading"><a href="https://simtk.org/mailman/listinfo/simvascular-news">Sign up</a> - <a href="https://simtk.org/pipermail/simvascular-news/">Archive</a></h6>
Announcements and latest news about SimVascular.<br><br>
<h6 class="media-heading"><a>Users Mailing List</a></h6>
<h6 class="media-heading"><a href="https://simtk.org/mailman/listinfo/simvascular-users">Sign up</a> - <a href="http://simvascular-users.40599.n7.nabble.com/">Archive</a></h6>
Join the SimVascular user mailing list and let us know what you think.<br><br>
<h6 class="media-heading"><a href="https://simtk.org/tracker/?group_id=188">Suggest new features or report bugs</a></h6>
Help us to improve SimVascular.<br><br>
</div>
</div>
</div> -->
</div>
</div>
</div>
</section>
<!-- Online Tutorials -->
<section id="onlinetutorials" class="container content-section text-left">
<h2>Online Tutorials</h2>
The <a href="https://www.youtube.com/channel/UCT61XgTRqpfb39Hyio9IqGQ"> SimVascular YouTube Channel </a> has a collection of
videos on a variety of topics related to the use of the SimVascular suite of software applications.
<br> <br>
The <a href="https://www.youtube.com/playlist?list=PL1CBZ8Wh-xvSKUsuBA4MM4Jba-psVdxXT"> SimVascular Tutorial series</a> consists of
recent videos demonstrating the complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.
<br>
</section>
<!-- Repository Section -->
<section id="repository" class="content-section">
<div class="container">
<div class="row text-left">
<div class="col-lg-12">
<h2>Vascular Model Repository</h2>
<!-- Description -->
<div class="media">
<a class="pull-left" href="#">
<img class="media-object" src="img/repbanner3.png" alt="...">
</a>
<div class="media-body">
<h4 class="media-heading">What is it</h4>
The vascular model repository, a sister project of SimVascular, is a library of computational models of normal and diseased human cardiovascular and pulmonary anatomy and input and output boundary conditions for various physiologic states. These models can be used to simulate cardiovascular and pulmonary solid and fluid mechanics and will provide spatially and temporally-resolved benchmark solutions that can be used by academic, government and industry researchers to verify their computational methods. Most models in the repository were created with SimVascular. The SimVascular project provides an open source package for simulation to accompany the data provided in the model repository.
</div>
</div>
</div>
</div>
<div class="row text-center">
<div class="col-lg-12 top-buffer">
<div href="#" class="thumbnail col-xs-4 col-sm-5 col-md-5 col-lg-5 thumBlackRepo">
<img class="media-object repoImgRight" src="img/vmr/image1.png" alt="...">
</div>
<div href="#" class="thumbnail col-xs-4 col-sm-2 col-md-2 col-lg-2 thumBlackRepo">
<img class="media-object repoImgCenter" src="img/vmr/model1.png" alt="...">
</div>
<div href="#" class="thumbnail col-xs-4 col-sm-5 col-md-5 col-lg-5 thumBlackRepo">
<img class="media-object repoImgLeft" src="img/vmr/result1.png" alt="...">
</div>
</div>
</div>
<div class="row text-center top-buffer">
<div class="col-lg-offset-4 col-lg-4">
<a href="http://www.vascularmodel.com/" role="button" class="btn btn-info btn-large">Visit the SV Model Repository</a>
</div>
</div>
</div>
</section>
<!-- Workshop Section -->
<section id="workshops" class="content-section text-center">
<div class="container">
<div class="col-lg-12">
<h2>Upcoming Workshops</h2>
<h4>Learn about SimVascular by attending one of our workshops</h4>
<a href="https:/sb3c.org/plenary/sb3c-pre-conference-workshop">
<h4>SB3C Pre-Conference Virtual Workshop, June 13th 2021</h4>
</a>
<a href="https://fimh2021.github.io/workshops/">
<h4>FIMH Virtual Workshop, June 21st 2021</h4>
</a>
<a href="https://www.cmbbe-symposium.com/2021/workshops/">
<h4>CMBBE Workshop, September 7th 2021</h4>
</a>
</div>
</div>
</section>
<!-- Our Team Section -->
<section id="team" class="content-section text-left">
<div class="container">
<div class="col-xs-12 col-sm-12 col-md-12 col-lg-12">
<h2>Our Team</h2>
<div class="row">
<!-- Team 1 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/amarsden.jpg" alt="...">
<div class="caption">
<h4><a href="http://cbcl.stanford.edu">Alison Marsden</a></h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Alison Marsden is an associate professor of Pediatrics (Cardiology) and of Bioengineering, by courtesy, of Mechanical Engineering at at Stanford University. She graduated with a bachelor’s degree in Mechanical Engineering from Princeton University in 1998, and a PhD in Mechanical Engineering from Stanford in 2005 working with Prof. Parviz Moin. She was a postdoctoral fellow at Stanford University in Bioengineering and Pediatric Cardiology from 2005-07 working with Charles Taylor and Jeffrey Feinstein. She was the recipient of an American Heart Association postdoctoral fellowship, an AHA beginning grant in aid award, a Burroughs Wellcome Fund Career Award at the Scientific Interface, an NSF CAREER award, and is a member of an international Leducq Foundation Network of Excellence. She has published over 60 peer reviewed journal papers, and her lab has received funding from the NSF, NIH, and several private foundations. Her work focuses on the development of numerical methods for simulation of cardiovascular blood flow problems, medical device design, application of optimization to large-scale fluid mechanics simulations, and use of engineering tools to impact patient care in cardiovascular surgery and congenital heart disease.</p>
</div>
</div>
</div>
</div>
<!-- Team 2 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/sshadden.jpg" alt="...">
<div class="caption">
<h4><a href="http://shaddenlab.berkeley.edu/">Shawn Shadden</a></h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Shawn Shadden is an Associate Professor of Mechanical Engineering at the University of California, Berkeley. His research focuses on the advancement of theoretical and computational methods to quantify complex fluid flow. He received a BS in Aerospace Engineering from The University of Texas at Austin (2001), and PhD in Control and Dynamical Systems from the California Institute of Technology (2006). From 2006-2009 he carried out an NSF Mathematical Sciences Postdoctoral Research Fellowship to translate his work in dynamical systems to research on cardiovascular biomechanics at Stanford University. From 2009-2013 he served as an Assistant Professor at the Illinois Institute of Technology in Chicago, IL, before joining the faculty at UC Berkeley.</p>
</div>
</div>
</div>
</div>
<!-- Team 3 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/nwilson.png" alt="...">
<div class="caption">
<h4><a href="http://www.vascularmodel.com/">Nathan Wilson</a></h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Dr. Nathan Wilson has started two medical-related software companies, served as a Principal Investigator on two SBIR research grants, co-authored over thirty peer-reviewed journal and conference publications, and teaches introductory classes in entrepreneurship, business plan development, and technology and science commercialization at UCLA. Nathan has a PhD in Mechanical Engineering from Stanford University and an MBA from UCLA Anderson.</p>
</div>
</div>
</div>
</div>
<!-- Team 4 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/dparker.jpg" alt="...">
<div class="caption">
<h4><a href="https://cbcl.stanford.edu/people/david-parker/">Dave Parker</a></h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Dave Parker is the lead software engineer for SimVascular. He received his Ph.D. in Biomechanical Engineering from Stanford University. While at the Georgia Institute of Technology he completed his B.S. in Computer Science and did graduate work in Applied Mathematics, concentrating on research in fractals and nonlinear dynamics. Prior to joining Stanford, he worked on various scientific and engineering software projects involving molecular simulation and visualization, analysis of next generation DNA sequencing data, simulating thermo-plastic deformations for 3D metal printing processes, finite element simulations of shock wave propagation in complex materials, and scientific visualization. While in Charles Taylor’s lab he developed software for image-based modeling of the human vasculature for patient-specific computational blood flow simulations.</p>
</div>
</div>
</div>
</div>
</div>
<div class="row">
<!-- Team 5 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/vvedula.jpg" alt="...">
<div class="caption">
<h4>Vijay Vedula</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Vijay Vedula is a postdoctoral fellow in the department of Pediatrics (Cardiology) at Stanford School of Medicine. His expertise is in modeling cardiac biomechanics and leads svFSI solver development for the SimCardio project. His other research interests include modeling fluid flow in and around complex bodies, multiphysics modeling and fluid-structure interaction, numerical methods and high performance computing. He received his Ph.D. in Mechanical Engineering from the Johns Hopkins University in 2015. He completed a Masters in Aerospace Engineering at the Indian Institute of Technology Kanpur in 2009 and a Bachelors in Mechanical Engineering at the National Institute of Technology Trichy (India) in 2007. He will be joining Columbia University as Assistant Professor of the Mechanical Engineering department in January 2020.</p>
</div>
</div>
</div>
</div>
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/akaiser.jpg" alt="...">
<div class="caption">
<h4>Alexander kaiser</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Alexander D. Kaiser is a postdoctoral scholar in the department of Cardiothoracic Surgery at Stanford School of Medicine. He completed his PhD in mathematics at the Courant Institute of Mathematical Sciences, New York University, where his research focused on modeling and simulation of the mitral valve. Currently, he is interested in building tools and developing methods for cardiac modeling, and using them to investigate surgical procedures. </p>
</div>
</div>
</div>
</div>
<!-- <div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/hlan.jpg" alt="...">
<div class="caption">
<h4>Hongzhi Lan</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Hongzhi Lan is a postdoctoral scholar in Pediatrics (Cardiology) and of Bioengineering at Stanford University. He received a bachelor degree(1999) in Mechanical Engineering from Tsinghua University, a master degree(2007) in Mechanical Engineering and a PhD(2013) in Biomedical Engineering from Tulane University. His research experiences include modeling/simulation of indentation on alloys and piezoelectric materials, biotransport of nutrients between cells in the bone matrix, and leukocyte deformation/migration using viscoelastic models. His current research interests focus on flow solver for cardiovascular simulation, development of the open source project SimVascular, and simulation for cardiovascular diseases and surgery.</p>
</div>
</div>
</div>
</div> -->
<!-- Team 6
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/aupdegrove.jpg" alt="...">
<div class="caption">
<h4>Adam Updegrove</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Adam Updegrove is a PhD student in the department of Mechanical Engineering at the University of California, Berkeley. He graduated with a BS in Mechanical Engineering at Rensselaer Polytechnic Institute in Troy, NY. At RPI, Adam received prestigious awards such as the Founder’s Award of Excellence and the Living W. Houston Citizenship Award. Adam was awarded the National Science Foundation Graduate Research Fellowship to help promote scientific innovation and teaching. Amongst other things, Adam loves playing soccer and volunteering in the Community.</p>
</div>
</div>
</div>
</div> -->
<!-- Team 7 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/gmaher.jpg" alt="...">
<div class="caption">
<h4>Gabriel Maher</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Gabriel Maher is a PhD student in Computational and Mathematical Engineering at Stanford University. He received his MS degree in Aerospace from Delft University of Technology.</p>
</div>
</div>
</div>
</div>
<!-- Team 8 -->
<div class="col-xs-12 col-sm-6 col-md-3 col-lg-3">
<div class="thumbnail bioThumbs">
<img src="img/bio/fkong.png" alt="...">
<div class="caption">
<h4>Fanwei Kong</h4>
<a class="expander" href="#">Bio notes</a>
<div class="content BioPar">
<p>Fanwei Kong is a PhD student majoring in Mechanical Engineering at the University of California, Berkeley. She graduated from Georgia Tech with a BS degree in biomedical engineering. </p>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<!-- Contact Section -->
<section id="contact" class="content-section text-center">
<div class="container">
<div class="col-xs-12 col-sm-12 col-md-8 col-md-offset-2 col-lg-8 col-lg-offset-2">
<h2>Contact us</h2>
<h4>We are very interested in your feedback and comments.</h4>
<div class="col-xs-12 col-sm-12 col-md-6 col-lg-6">
<!-- <h6 class="media-heading"><a>Users Mailing List</a></h6>
<h6 class="media-heading"><a href="https://simtk.org/mailman/listinfo/simvascular-users">Sign up</a> - <a href="https://simtk.org/pipermail/simvascular-users/">Archive</a></h6>
Announcements and latest news about SimVascular.<br><br> -->
<h6 class="media-heading"><a>News Mailing List</a></h6>
<h6 class="media-heading"><a href="https://simtk.org/mailman/listinfo/simvascular-news">Sign up</a> - <a href="https://simtk.org/pipermail/simvascular-news/">Archive</a></h6>
Announcements and latest news about SimVascular.<br><br>
<h6 class="media-heading"><a href="https://simtk.org/forums/viewforum.php?f=188">SimVascular Public Forum</a></h6>
Interact with other SimVascular users.<br><br>
<!-- CONTANT FORM - OLD
<form id="contact-us" class="form-horizontal" role="form" method="post" action="php/sendMail.php">
<div class="form-group has-feedback">
<label for="visitorName" class="col-sm-2 control-label">Name</label>
<div class="col-sm-10">
<input type="text" class="form-control requiredField" name="visitorName" id="visitorName" placeholder="Name">
</div>
</div>
<div class="form-group has-feedback">
<label for="visitorMail" class="col-sm-2 control-label">Email</label>
<div class="col-sm-10">
<input type="email" class="form-control requiredField" name="visitorMail" id="visitorMail" placeholder="Email">
</div>
</div>
<div class="form-group has-feedback">
<textarea class="form-control requiredField" rows="5" name="visitorMessage" placeholder="Leave us a comment or contact us for consulting and customizations of SimVascular..."></textarea>
</div>
<div class="form-group">
<div class="col-lg-12">
<button type="submit" name="go" class="btn btn-primary btn-block btn-lg">Send Comment</button>
</div>
</div>
</form>
-->
</div>
<!-- OTHER BUTTONS -->
<div class="col-xs-12 col-sm-12 col-md-6 col-lg-6">
<h6 class="media-heading"><a href="https://github.com/SimVascular/SimVascular/issues">Suggest new features or report bugs</a></h6>
Help us to improve SimVascular.<br><br>
<h6 class="media-heading"><a href="http://benefunder.org/causes/186/alison-marsden">Make a Donation</a></h6>
Support our Research.<br><br>
</div>
</div>
</div>
</section>
<!-- Footer -->
<footer>
<div class="container text-center">
<h5>Copyright © SimVascular Development Team - 2017</h5>
</div>
</footer>
<script src="js/jquery-1.11.0.js" type="text/javascript"></script><script src="js/bootstrap.min.js" type="text/javascript"></script><script src="js/bootstrap-select.min.js" type="text/javascript"></script><script src="js/jquery.easing.min.js" type="text/javascript"></script><script src="js/grayscale.js" type="text/javascript"></script><script src="js/simple-expand.min.js" type="text/javascript"></script><script src="js/svVideo.js" type="text/javascript"></script>
<script src="//vjs.zencdn.net/4.8/video.js"></script>
<script src="https://apis.google.com/js/platform.js" async defer></script>
<script>
(function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){
(i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m)
})(window,document,'script','//www.google-analytics.com/analytics.js','ga');
ga('create', 'UA-55333921-1', 'auto');
ga('send', 'pageview');
</script>
<script type="text/javascript" src="https://apis.google.com/js/plusone.js"></script>
<script>
!function(d,s,id){
var js,fjs=d.getElementsByTagName(s)[0],p=/^http:/.test(d.location)?'http':'https';
if(!d.getElementById(id)){
js=d.createElement(s);
js.id=id;
js.src=p+"://platform.twitter.com/widgets.js";
fjs.parentNode.insertBefore(js,fjs);
}
}(document,"script","twitter-wjs");
$(document).ready(function() {
// Select Peeker
$('.selectpicker').selectpicker({
size: 8
});
// Content Expansion
$('.expander').simpleexpand();
// Form Submission
$('form#contact-us').submit(function() {
$('form#contact-us .error').remove();
$('form#contact-us span').remove();
$('div#resDiv').remove();
var hasError = false;
$('.requiredField').each(function() {
$(this).parent().removeClass('has-error');
if($.trim($(this).val()) == '') {
var labelText = $(this).prev('label').text();
$(this).parent().addClass('has-error');
$(this).parent().append('<span class="glyphicon glyphicon-remove form-control-feedback"></span>');
hasError = true;
} else if($(this).hasClass('email')) {
var emailReg = /^([\w-\.]+@([\w-]+\.)+[\w-]{2,4})?$/;
if(!emailReg.test($.trim($(this).val()))) {
var labelText = $(this).prev('label').text();
$(this).parent().append('<span class="error">Sorry! You\'ve entered an invalid '+labelText+'.</span>');
$(this).addClass('inputError');
hasError = true;
}
}else{
$(this).parent().addClass('has-success');
$(this).parent().append('<span class="glyphicon glyphicon-ok form-control-feedback"></span>');
}
});
// if content OK
if(!hasError) {
var formInput = $(this).serialize();
$.post($(this).attr('action'),formInput, function(data,status){
console.log(data);
$('form#contact-us').after('<div id="resDiv" class="alert alert-success" role="alert"><p>Mail Sent!</p></div>');
});
}else{
$('form#contact-us').after('<div id="resDiv" class="alert alert-danger" role="alert"><p>Please Review Your Data</p></div>');
}
return false;
});
});
</script>
</body>
</html>