From d32051467c2b80fd975d988aba31f578f9189501 Mon Sep 17 00:00:00 2001 From: Chiara Monforte Date: Mon, 4 Mar 2024 11:47:05 +0100 Subject: [PATCH 1/2] Added yaml for SEA44_M89 --- mission_yaml/SEA44_M89.yml | 377 +++++++++++++++++++++++++++++++++++++ 1 file changed, 377 insertions(+) create mode 100644 mission_yaml/SEA44_M89.yml diff --git a/mission_yaml/SEA44_M89.yml b/mission_yaml/SEA44_M89.yml new file mode 100644 index 0000000..4f3d498 --- /dev/null +++ b/mission_yaml/SEA44_M89.yml @@ -0,0 +1,377 @@ +metadata: + acknowledgement: This study used data collected and made freely available by Voice + of the Ocean Foundation (https://voiceoftheocean.org) accessed from https://erddap.observations.voiceoftheocean.org/erddap/index.html + institution: Voice of the Ocean Foundation + license: Creative Commons Attribution 4.0 (https://creativecommons.org/licenses/by/4.0/) + This study used data collected and made freely available by Voice of the Ocean + Foundation (https://voiceoftheocean.org) accessed from https://erddap.observations.voiceoftheocean.org/erddap/index.html + format_version: IOOS_Glider_NetCDF_v2.0.nc + glider_model: SeaExplorer + glider_instrument_name: seaexplorer + keywords: AUVS, Autonomous Underwater Vehicles, Oceans, Ocean Pressure, Water Pressure, + Ocean Temperature, Water Temperature, Salinity/Density, Conductivity, Density, + Salinity + keywords_vocabulary: GCMD Science Keywords + metadata_link: http://cfconventions.org/cf-conventions/v1.6.0/cf-conventions.html + Metadata_Conventions: CF-1.6, Unidata Dataset Discovery v1.0 + naming_authority: Voice of the Ocean Foundation + platform: SeaExplorer Glider + processing_level: Data provided as is with no expressed or implied assurance of + quality assurance or quality control. L0 + publisher_email: callum.rollo@voiceoftheocean.org + publisher_name: Callum Rollo + publisher_url: https://voiceoftheocean.org + references: created with pyglider https://github.com/c-proof/pyglider + source: Observational data from a profiling glider. + standard_name_vocabulary: CF STandard Name Table v49 + sea_name: Baltic + transmission_system: IRIDIUM + glider_name: Martorn + glider_serial: '44' + wmo_id: '6801672' + comment: .nan + contributor_name: Callum Rollo, Louise Biddle, Olle Petersson, Aleksandra Mazur, + Marcus Melin, Gunnar Johnsson, Andrew Birkett, Chiara Monforte + contributor_role: Data Processor, PI, Head of Operations, Glider Technician, Glider + Technician, Glider Technician, Glider Technician, Glider Pilot + creator_email: callum.rollo@voiceoftheocean.org + creator_name: Callum Rollo + creator_url: https://observations.voiceoftheocean.org + deployment_id: '89' + deployment_name: SAMBA + project: SAMBA + project_url: https://voiceoftheocean.org/samba-smart-autonomous-monitoring-of-the-baltic-sea/ + summary: ' Part of SAMBA continuous monitoring' +glider_devices: + altimeter: + make: UNKNOWN + model: UNKNOWN + serial: '53' + ctd: + make: RBR + model: legato + serial: '205048' + long_name: RBR legato CTD + make_model: RBR legato CTD + factory_calibrated: 'Yes' + calibration_date: '2023-11-09' + optics: + make: Wetlabs + model: FLBBPC + serial: '6597' + long_name: Wetlabs ECO Puck FLBBPC + make_model: Wetlabs FLBBPC + factory_calibrated: 'Yes' + calibration_date: '2020-12-22' + calibration_parameters: + Chl_DarkCounts: 46 + Chl_SF: 0.0072 + PC_DarkCounts: 45 + PC_SF: 0.0386 + SIG_DarkCounts: 45 + SIG_SF: 1.722e-06 + oxygen: + make: JFE Advantech + model: AROD-FT + serial: 0058 + long_name: JFE Advantech RINKO-FT + make_model: JFE Advantech AROD_FT + factory_calibrated: 'Yes' + calibration_date: '2023-08-26' +netcdf_variables: + keep_variables: + - temperature + - oxygen_concentration + - chlorophyll + timebase: + source: NAV_LATITUDE + time: + source: time + long_name: Time + standard_name: time + calendar: gregorian + units: seconds since 1970-01-01T00:00:00Z + axis: T + observation_type: measured + coordinates: time depth latitude longitude + latitude: + source: NAV_LATITUDE + long_name: latitude + standard_name: latitude + units: degrees_north + axis: Y + coordinates: time depth latitude longitude + conversion: nmea2deg + comment: Estimated between surface fixes + observation_type: measured + platform: platform + reference: WGS84 + valid_max: '90.0' + valid_min: '-90.0' + coordinate_reference_frame: urn:ogc:crs:EPSG::4326 + longitude: + source: NAV_LONGITUDE + long_name: longitude + standard_name: longitude + units: degrees_east + axis: X + coordinates: time depth latitude longitude + conversion: nmea2deg + comment: Estimated between surface fixes + observation_type: measured + platform: platform + reference: WGS84 + valid_max: '180.0' + valid_min: '-180.0' + coordinate_reference_frame: urn:ogc:crs:EPSG::4326 + nav_state: + source: NAV_RESOURCE + long_name: seaexplorer navigation state + standard_name: navigation_state + units: None + coordinates: time depth latitude longitude + heading: + source: Heading + long_name: glider heading angle + standard_name: platform_orientation + units: degrees + coordinates: time depth latitude longitude + pitch: + source: Pitch + long_name: glider pitch angle + standard_name: platform_pitch_angle + units: degrees + coordinates: time depth latitude longitude + roll: + source: Roll + long_name: glider roll angle + standard_name: platform_roll_angle + units: degrees + coordinates: time depth latitude longitude + dive_num: + source: fnum + long_name: glider dive number from original SeaExplorer filename + standard_name: dive_number + units: None + coordinates: time depth latitude longitude + security_level: + source: SecurityLevel + long_name: security level + standard_name: security_level + units: None + coordinates: time depth latitude longitude + declination: + source: Declination + long_name: declination + standard_name: declination + units: None + coordinates: time depth latitude longitude + internal_temperature: + source: Temperature + long_name: internal temperature + standard_name: internal_temperature + units: Celsius + coordinates: time depth latitude longitude + internal_pressure: + source: Pa + long_name: internal pressure + standard_name: internal_pressure + units: Pa + coordinates: time depth latitude longitude + desired_heading: + source: DesiredH + long_name: glider desired heading angle + standard_name: platform_desired_orientation + units: degrees + coordinates: time depth latitude longitude + ballast_cmd: + source: BallastCmd + long_name: glider ballast command + standard_name: ballast_command + units: ml + coordinates: time depth latitude longitude + ballast_pos: + source: BallastPos + long_name: glider ballast position + standard_name: ballast_position + units: ml + coordinates: time depth latitude longitude + linear_cmd: + source: LinCmd + long_name: glider linear command + standard_name: linear_command + units: cm + coordinates: time depth latitude longitude + linear_pos: + source: LinPos + long_name: glider linear position + standard_name: linear_position + units: cm + coordinates: time depth latitude longitude + angular_cmd: + source: AngCmd + long_name: glider angular command + standard_name: angular_command + units: degrees + coordinates: time depth latitude longitude + angular_pos: + source: AngPos + long_name: glider angular position + standard_name: angular_position + units: degrees + coordinates: time depth latitude longitude + voltage: + source: Voltage + long_name: glider voltage + standard_name: platform_voltage + units: V + coordinates: time depth latitude longitude + altimeter: + source: Altitude + long_name: glider altimeter reading + standard_name: glider_altimeter_reading + units: m + coordinates: time depth latitude longitude + dead_reckoning: + source: DeadReckoning + long_name: dead reckoning + standard_name: dead_reckoning + units: None + coordinates: time depth latitude longitude + nav_resource: + source: NAV_RESOURCE + long_name: nav resource + standard_name: nav_resource + units: None + coordinates: time depth latitude longitude + conductivity: + source: LEGATO_CONDUCTIVITY + long_name: water conductivity + standard_name: sea_water_electrical_conductivity + units: mS cm-1 + coordinates: time depth latitude longitude + instrument: instrument_ctd + valid_min: '0.' + valid_max: '85.' + observation_type: measured + accuracy: '0.003' + resolution: '0.001' + temperature: + source: LEGATO_TEMPERATURE + long_name: water temperature + standard_name: sea_water_temperature + units: Celsius + coordinates: time depth latitude longitude + instrument: instrument_ctd + valid_min: '-5' + valid_max: '42' + observation_type: measured + accuracy: '0.002' + resolution: '0.00005' + pressure: + source: LEGATO_PRESSURE + long_name: water pressure + standard_name: sea_water_pressure + units: dbar + coordinates: time depth latitude longitude + valid_min: '0' + valid_max: '1000' + positive: down + reference_datum: sea-surface + instrument: instrument_ctd + observation_type: measured + accuracy: '0.5' + resolution: '0.01' + comment: ctd pressure sensor + salinity: + source: LEGATO_SALINITY + long_name: water salinity + standard_name: sea_water_salinity + units: PSU + coordinates: time depth latitude longitude + instrument: instrument_ctd + valid_min: '0.' + valid_max: '50.' + observation_type: calculated + accuracy: '0.02' + resolution: '0.01' + chlorophyll: + source: FLBBPC_CHL_SCALED + long_name: chlorophyll + standard_name: concentration_of_chlorophyll_in_sea_water + units: mg m-3 + coordinates: time depth latitude longitude + instrument: instrument_flourometer + valid_min: '0.' + valid_max: '50.' + observation_type: calculated + sensitivity: '0.025' + chlorophyll_raw: + source: FLBBPC_CHL_COUNT + long_name: raw chlorophyll + standard_name: raw_chlorophyll_in_sea_water + units: counts + coordinates: time depth latitude longitude + instrument: instrument_flourometer + phycocyanin: + source: FLBBPC_PC_SCALED + long_name: phycocyanin + standard_name: concentration_of_phycocyanin_in_sea_water + units: mg m-3 + coordinates: time depth latitude longitude + instrument: instrument_flourometer + valid_min: '0.' + valid_max: '175.' + observation_type: calculated + sensitivity: '0.09' + phycocyanin_raw: + source: FLBBPC_PC_COUNT + long_name: raw phycocyanin + standard_name: raw_phycocyanin_in_sea_water + units: counts + coordinates: time depth latitude longitude + instrument: instrument_flourometer + backscatter_scaled: + source: FLBBPC_BB_700_SCALED + long_name: "700 nm \u03B2 total volume scattering coefficient at 117 degree angle" + standard_name: 700_nm_wavelength_total_volume_scattering_coefficient + units: m-1 sr-1 + coordinates: time depth latitude longitude + instrument: instrument_scatterometer + valid_min: '0.' + valid_max: '3.' + observation_type: calculated + sensitivity: '0.002' + backscatter_raw: + source: FLBBPC_BB_700_COUNT + long_name: raw 700 nm wavelength backscatter + standard_name: raw_700_nm_wavelength_backscatter_in_sea_water + units: counts + coordinates: time depth latitude longitude + instrument: instrument_scatterometer + oxygen_concentration: + source: AROD_FT_DO + long_name: oxygen concentration + standard_name: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water + units: mmol m-3 + coordinates: time depth latitude longitude + correct_oxygen: 'True' + reference_salinity: '0' + instrument: instrument_phosphorescence + valid_min: '0.' + valid_max: '425.' + observation_type: calculated + accuracy: 2% or 2.0 + resolution: '0.01' + temperature_oxygen: + source: AROD_FT_TEMP + long_name: oxygen sensor temperature + standard_name: temperature_of_sensor_for_oxygen_in_sea_water + units: Celsius + coordinates: time depth latitude longitude + instrument: instrument_thermistor + valid_min: '-3.' + valid_max: '45.' + observation_type: measured + accuracy: '0.01' + resolution: '0.001' From 73b07c897b8861e50e2c8f7b7c23fcc22e35ed6a Mon Sep 17 00:00:00 2001 From: Chiara Monforte Date: Mon, 4 Mar 2024 11:50:18 +0100 Subject: [PATCH 2/2] Added mission comments for SEA069_M025 --- mission_yaml/SEA69_M25.yml | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/mission_yaml/SEA69_M25.yml b/mission_yaml/SEA69_M25.yml index add2983..b2aeac7 100644 --- a/mission_yaml/SEA69_M25.yml +++ b/mission_yaml/SEA69_M25.yml @@ -29,7 +29,9 @@ metadata: glider_name: Kalmus glider_serial: '69' wmo_id: '6801506' - comment: .nan + comment: Altitude set to 2m for the entire mission duration . Zt/zs set to 2m for + most of the mission but often increased to 15 or 20m when the glider struggled + with strong currents. Glider struggled with strong currents so it was often outside the desired transect contributor_name: Callum Rollo, Louise Biddle, Olle Petersson, Aleksandra Mazur, Marcus Melin, Gunnar Johnsson, Andrew Birkett, Chiara Monforte contributor_role: Data Processor, PI, Head of Operations, Glider Technician, Glider