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New function to filter out intersections of DE genes from bbcSE object. Usage: intersect_degs(bbc_obj, de_in=list(contrastA, contrastB, contrastC)). Can implement venn::venn or similar to do this easily.
Add ability to filter columns by regex. Can just implement using grep.
Option to plot either log normalized counts, their means or LFCs parsed from the contrasts stored in bbcSE.
New function to extract the Ensembl IDs for specific gene sets from KEGG, Reactome etc
The text was updated successfully, but these errors were encountered:
New function to filter out intersections of DE genes from bbcSE object. Usage: intersect_degs(bbc_obj, de_in=list(contrastA, contrastB, contrastC)). Can implement venn::venn or similar to do this easily.
Add ability to filter columns by regex. Can just implement using grep.
Option to plot either log normalized counts, their means or LFCs parsed from the contrasts stored in bbcSE.
New function to extract the Ensembl IDs for specific gene sets from KEGG, Reactome etc
The text was updated successfully, but these errors were encountered: