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Integrate file identifier mappings #1681

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holtgrewe opened this issue Jun 6, 2024 · 1 comment
Closed

Integrate file identifier mappings #1681

holtgrewe opened this issue Jun 6, 2024 · 1 comment
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enhancement New feature or request

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@holtgrewe
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Is your feature request related to a problem? Please describe.
In our phenopacket case manifest file, we allow users to provide sample identifier mappings. This is required so users can harmonize identifiers from "technical ones" in VCF/BAM files towards the ones used in the case. varfish-org/varfish-server-worker#364 implements this in the worker but we have no integration in the server.

Describe the solution you'd like
Call worker appropriately.

Describe alternatives you've considered
N/A

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@holtgrewe holtgrewe added the enhancement New feature or request label Jun 6, 2024
@holtgrewe holtgrewe moved this to Ready in Release Planning Jun 6, 2024
@holtgrewe holtgrewe moved this from Ready to In progress in Release Planning Jun 6, 2024
@holtgrewe holtgrewe self-assigned this Jun 6, 2024
@holtgrewe holtgrewe changed the title Integrade file identifier mappings Integrate file identifier mappings Jun 6, 2024
@holtgrewe
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Fixed by #1680.

@github-project-automation github-project-automation bot moved this from In progress to Done in Release Planning Jun 13, 2024
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