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feat: remove gene regions from "strucvars query" database enhancement (#221) #222

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merged 6 commits into from
Oct 11, 2023

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@holtgrewe holtgrewe linked an issue Oct 11, 2023 that may be closed by this pull request
@holtgrewe holtgrewe enabled auto-merge (squash) October 11, 2023 12:35
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codecov bot commented Oct 11, 2023

Codecov Report

Attention: 23 lines in your changes are missing coverage. Please review.

Comparison is base (1fb3c58) 79.25% compared to head (8ec5ba6) 78.61%.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #222      +/-   ##
==========================================
- Coverage   79.25%   78.61%   -0.64%     
==========================================
  Files          28       27       -1     
  Lines        4275     4158     -117     
==========================================
- Hits         3388     3269     -119     
- Misses        887      889       +2     
Files Coverage Δ
src/common.rs 83.21% <ø> (ø)
src/main.rs 0.00% <ø> (ø)
src/strucvars/aggregate/cli.rs 89.34% <ø> (ø)
src/strucvars/query/bgdbs.rs 83.03% <ø> (-0.90%) ⬇️
src/strucvars/query/genes.rs 96.96% <ø> (+16.13%) ⬆️
src/strucvars/query/masked.rs 90.36% <ø> (ø)
src/strucvars/query/schema.rs 76.55% <100.00%> (-0.08%) ⬇️
src/strucvars/txt_to_bin/cli.rs 100.00% <ø> (ø)
src/strucvars/query/interpreter.rs 94.71% <70.00%> (ø)
src/strucvars/query/mod.rs 53.30% <64.91%> (-4.28%) ⬇️

... and 3 files with indirect coverage changes

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@holtgrewe holtgrewe merged commit 28663b6 into main Oct 11, 2023
11 of 13 checks passed
@holtgrewe holtgrewe deleted the 221-remove-gene-regions-from-strucvars-query-database branch October 11, 2023 13:25
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Remove gene regions from "strucvars query" database
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