diff --git a/Cargo.lock b/Cargo.lock
index 50de374a..f50ad56f 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -255,9 +255,9 @@ dependencies = [
 
 [[package]]
 name = "annonars"
-version = "0.20.0"
+version = "0.21.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "856d2a30152c991d240d14a38c724f0f800e65d44a5b9ea34279cd67a9e6f912"
+checksum = "fe254418f47df5e2ca6dadf365aa55865d8e9740388422faf3e81b64729ba337"
 dependencies = [
  "actix-web",
  "anyhow",
@@ -1989,9 +1989,9 @@ dependencies = [
 
 [[package]]
 name = "noodles-vcf"
-version = "0.39.0"
+version = "0.40.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1a056c06c7b33d5ba10bb59c09cca9500b02c3e0ead964dd4cf8f0068159783a"
+checksum = "dcd62cddca514dd04a13d3f4bf4ff83b5c7bca63c8e6b9ae0de2186ea6517a48"
 dependencies = [
  "indexmap 2.0.0",
  "memchr",
@@ -2052,16 +2052,6 @@ dependencies = [
  "libm",
 ]
 
-[[package]]
-name = "num_cpus"
-version = "1.16.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4161fcb6d602d4d2081af7c3a45852d875a03dd337a6bfdd6e06407b61342a43"
-dependencies = [
- "hermit-abi",
- "libc",
-]
-
 [[package]]
 name = "number_prefix"
 version = "0.4.0"
@@ -2486,9 +2476,9 @@ checksum = "60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3"
 
 [[package]]
 name = "rayon"
-version = "1.7.0"
+version = "1.8.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1d2df5196e37bcc87abebc0053e20787d73847bb33134a69841207dd0a47f03b"
+checksum = "9c27db03db7734835b3f53954b534c91069375ce6ccaa2e065441e07d9b6cdb1"
 dependencies = [
  "either",
  "rayon-core",
@@ -2496,14 +2486,12 @@ dependencies = [
 
 [[package]]
 name = "rayon-core"
-version = "1.11.0"
+version = "1.12.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4b8f95bd6966f5c87776639160a66bd8ab9895d9d4ab01ddba9fc60661aebe8d"
+checksum = "5ce3fb6ad83f861aac485e76e1985cd109d9a3713802152be56c3b1f0e0658ed"
 dependencies = [
- "crossbeam-channel",
  "crossbeam-deque",
  "crossbeam-utils",
- "num_cpus",
 ]
 
 [[package]]
diff --git a/Cargo.toml b/Cargo.toml
index 88ce38a5..5406f41c 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -27,7 +27,7 @@ path = "src/main.rs"
 
 [dependencies]
 actix-web = "4.4"
-annonars = "0.20"
+annonars = "0.21"
 anyhow = "1.0"
 bgzip = "0.3"
 bio = "1.3"
@@ -52,7 +52,7 @@ noodles-core = "0.12"
 noodles-csi = "0.24"
 noodles-fasta = "0.29"
 noodles-tabix = "0.29"
-noodles-vcf = "0.39"
+noodles-vcf = "0.40"
 parse-display = "0.8"
 procfs = "0.15"
 prost = "0.12"
diff --git a/tests/data/annotate/strucvars/example-grch38.vcf b/tests/data/annotate/strucvars/example-grch38.vcf
index db9e7e71..2357b446 100644
--- a/tests/data/annotate/strucvars/example-grch38.vcf
+++ b/tests/data/annotate/strucvars/example-grch38.vcf
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:269cd65dac9d34cfd0469e6bae1fbc3c56ce716e6ec2be767bb87620ea98034e
-size 5666
+oid sha256:072c790f5e723cf18a270173e945ac7431930a5646abbb362ece703a810da569
+size 5648
diff --git a/tests/data/annotate/strucvars/header-grch37-noped.vcf b/tests/data/annotate/strucvars/header-grch37-noped.vcf
index 713d30a5..05cc6d4a 100644
--- a/tests/data/annotate/strucvars/header-grch37-noped.vcf
+++ b/tests/data/annotate/strucvars/header-grch37-noped.vcf
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:ef422278360dfa7af198eff4be07764b6a3a1453d33e473c5464cc24ff1cf948
-size 4669
+oid sha256:cea860e0e2ab63f69a9ea8fbb5e81f144f2cd31c7f32ca2b9c965fa44f3187af
+size 4651
diff --git a/tests/data/annotate/strucvars/header-grch37-trio.vcf b/tests/data/annotate/strucvars/header-grch37-trio.vcf
index 8746c3ed..00b30657 100644
--- a/tests/data/annotate/strucvars/header-grch37-trio.vcf
+++ b/tests/data/annotate/strucvars/header-grch37-trio.vcf
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:19f9f4da757a7083532a8149668eb0c17a30d12cb19cc029ea88b25a43fbf706
-size 4956
+oid sha256:abf66786d35dc801f7baa46cf324db3d901c5cc332a6f3d39179c16b4b00e671
+size 4938
diff --git a/tests/data/annotate/strucvars/header-grch38-noped.vcf b/tests/data/annotate/strucvars/header-grch38-noped.vcf
index 5b5556e1..f78a7bfc 100644
--- a/tests/data/annotate/strucvars/header-grch38-noped.vcf
+++ b/tests/data/annotate/strucvars/header-grch38-noped.vcf
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:cf938ad4052b0bb0b59adc6fa03f5c8431608f01e20a2bdccefbb3ec1693b7cf
-size 4676
+oid sha256:c1dbc7c507453ac22a4fbf5aae2ca022fd5d794931414a2c754bd927c55d0c81
+size 4658
diff --git a/tests/data/annotate/strucvars/maelstrom/delly2-min-with-maelstrom.vcf b/tests/data/annotate/strucvars/maelstrom/delly2-min-with-maelstrom.vcf
index f09577f4..e625988f 100644
--- a/tests/data/annotate/strucvars/maelstrom/delly2-min-with-maelstrom.vcf
+++ b/tests/data/annotate/strucvars/maelstrom/delly2-min-with-maelstrom.vcf
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:33ccbbb691f8201b90584b0ea9dee52858ba8062276fbb08a8668680194efaaa
-size 5029
+oid sha256:f9e5785fbc9d04b7d139cf96f9f836cf8a47181045eb00fb8d1d80518645d74e
+size 5011