0.17.4 (2024-12-09)
0.17.3 (2024-10-04)
0.17.2 (2024-08-06)
0.17.1 (2024-07-26)
0.17.0 (2024-07-25)
0.16.3 (2024-07-16)
0.16.2 (2024-07-14)
- add biotype vaultRNA_primary_transcript (#180) (d59783c)
- add biotype vaultRNA_primary_transcript (#183) (4345377)
- add partial field to cdot json representation struct (#179) (113a06a)
- add Serialize to data::cdot::json representations (#176) (2de1b8a)
0.16.1 (2024-06-10)
0.16.0 (2024-03-05)
0.15.0 (2024-02-08)
0.14.1 (2023-11-19)
0.14.0 (2023-11-19)
0.13.2 (2023-11-08)
0.13.1 (2023-11-08)
0.13.0 (2023-11-08)
0.12.0 (2023-10-21)
0.11.0 (2023-09-18)
0.10.1 (2023-07-04)
0.10.0 (2023-07-04)
- bump version to 0.10.0 (7bf4cbd)
0.9.0 (2023-06-12)
0.8.2 (2023-06-08)
0.8.1 (2023-05-23)
0.8.0 (2023-05-23)
0.7.0 (2023-04-24)
0.6.2 (2023-04-18)
0.6.1 (2023-04-06)
- cases where dup/inv goes beyond CDS (#89) (5d951b1)
- only warn on combining RefAlt with whole gene deletion (#92) (bff6c72)
- out of bound panic in case of long deletions (#91) (f0bcaa6)
- out of bounds issue for protein sequence creation (#93) (a40a5f5)
- out of bounds issue on 5'-to-3' shifting beyond CDS (#94) (4fccdb8)
- problem with variants in multi-stop codon txs (#95) (#96) (f25658c)
0.6.0 (2023-04-05)
0.5.2 (2023-04-04)
0.5.1 (2023-04-03)
0.5.0 (2023-03-31)
- allow configuring that there is no genome sequence (#65) (cd5b7bb)
- replacing usages of unwrap() with expect or Result (#70) (#73) (94d6f88)
- case of missing stop codon (in particular ENSEMBL) (#72) (a44e28c)
- fixing wrong validation assumption about insertions (#64) (f58ff53)
- issue with transcripts missing stop codon (#67) (f70bb91)
- return error if problem in normalization (#71) (b656d2a)
- return error in normalization instead of unwrap() (#68) (8144db6)
0.4.0 (2023-03-27)
- allow for disabling renormalization (#53) (b2f5dbe)
- improved normalizer configuration (#52) (2db5e92)
- make sequences module public (#54) (cfbb134)
- more comprehensive clone for field-less enums (#58) (3ada6b2)
- cases of empty sequence (#61) (0a6a109)
- fixing projection issues with cdot::json::Provider (#55) (edd0de9)
- fixing wrong validation assumption about insertions (#62) (bf027dc)
- interpret replace_reference condition (#49) (8326a55)
- issue with out of bounds deletion (#59) (475398d)
- remove ref length validation (#57) (763b7a3)
- truncate AA insertion at stop codon (#60) (54231b9)
0.3.1 (2023-03-13)
0.3.0 (2023-03-13)
0.2.0 (2023-03-06)
0.1.1 (2023-03-03)
- implement AlignmentMapper (#14) (#15) (07b573d)
- implement Display for HgvsVariant and related types (#4) (#6) (8e81536)
- implement parsing of HGVS variants (#2) (#3) (dbcfd05)
- implement VariantMapper (#12) (#13) (44b10de)
- implementing AssemblyMapper (#7) (#35) (9f3e0f3)
- port over access to the UTA data structures (#10) (#11) (3e71e32)
- port over assembly info from bioutils (#8) (#9) (d583556)
- port over variant normalizer (#19) (#20) (8593068)
- porting over test_hgvs_variantmapper_gcp (#21) (#27) (7f925c8)
- porting over test_variantmapper_cp_real (#21) (#26) (6873324)
- start to port over test_hgvs_grammer_full.py (#21) (#31) (9d3e3b5)