fix: use /api/v1/genes/clinvar in server

[holtgrewe]

Summary by CodeRabbit

• New Features

  • Introduced a new service endpoint for handling ClinVar gene data with OpenAPI documentation.
  • Enhanced API capabilities for better interaction with gene information.

• Bug Fixes

  • No bug fixes included in this release.

• Documentation

  • Updated API documentation to reflect the new endpoint for ClinVar data.

[coderabbitai]

Caution

Review failed

The pull request is closed.

Walkthrough

The pull request introduces a new service endpoint for handling ClinVar gene data within the Actix web server, specifically in the src/server/run/mod.rs file. This is achieved by adding the genes_clinvar::handle_with_openapi method to the server's configuration. The main function continues to serve as the entry point, and while the new endpoint expands the server's API capabilities, it does not alter existing control flow or error handling. The overall structure of the server's data management remains intact.

Changes

File	Change Summary
src/server/run/mod.rs	Added .service(genes_clinvar::handle_with_openapi) in main function to handle ClinVar gene data requests with OpenAPI documentation.

Possibly related PRs

• feat: endpoint /api/v1/genes/lookup with OpenAPI (#587) #589: The changes in this PR involve adding a new endpoint with OpenAPI documentation for gene lookup, which is related to the main PR's addition of a service endpoint for ClinVar gene data with OpenAPI documentation.
• feat: endpoint /api/v1/strucvars/clinvar-annos/query with OpenAPI (#578) #591: This PR introduces a new endpoint for querying ClinVar annotations, which aligns with the main PR's focus on enhancing the server's capabilities for handling ClinVar data.
• feat: add /api/v1/seqvars/annos/query with OpenAPI (#577) #592: Although this PR focuses on a different endpoint, it also involves enhancements to OpenAPI documentation, which is a common theme with the main PR's changes regarding API interactions.

🐰 In the meadow, new routes bloom,
For ClinVar data, there's now more room.
With OpenAPI, we share and explain,
Hop on the web, let knowledge reign!
A server enhanced, with joy we sing,
More endpoints for all, what joy they bring! 🌼

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