From b4854b86522d4d1cc1e33274d84fe8a74aabc405 Mon Sep 17 00:00:00 2001
From: Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>
Date: Tue, 28 May 2024 14:04:47 +0200
Subject: [PATCH] chore: bump dependencies, fix new clippy lints (#452)

---
 Cargo.lock                               | 885 +++++++++++------------
 Cargo.toml                               |  34 +-
 src/gnomad_sv/cli/import/gnomad_cnv4.rs  |  22 +-
 src/gnomad_sv/cli/import/gnomad_sv2.rs   |  17 +-
 src/gnomad_sv/cli/import/gnomad_sv4.rs   |  27 +-
 src/server/actix_server/annos_db_info.rs |  11 +-
 src/tsv/coding.rs                        |   6 +-
 7 files changed, 473 insertions(+), 529 deletions(-)

diff --git a/Cargo.lock b/Cargo.lock
index e2b9e28a..3ccdbb8b 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -8,7 +8,7 @@ version = "0.5.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "5f7b0a21988c1bf877cf4759ef5ddaac04c1c9fe808c9142ecb78ba97d97a28a"
 dependencies = [
- "bitflags 2.4.2",
+ "bitflags",
  "bytes",
  "futures-core",
  "futures-sink",
@@ -21,17 +21,17 @@ dependencies = [
 
 [[package]]
 name = "actix-http"
-version = "3.6.0"
+version = "3.7.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d223b13fd481fc0d1f83bb12659ae774d9e3601814c68a0bc539731698cca743"
+checksum = "4eb9843d84c775696c37d9a418bbb01b932629d01870722c0f13eb3f95e2536d"
 dependencies = [
  "actix-codec",
  "actix-rt",
  "actix-service",
  "actix-utils",
  "ahash",
- "base64",
- "bitflags 2.4.2",
+ "base64 0.22.1",
+ "bitflags",
  "brotli",
  "bytes",
  "bytestring",
@@ -65,18 +65,20 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "e01ed3140b2f8d422c68afa1ed2e85d996ea619c988ac834d255db32138655cb"
 dependencies = [
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "actix-router"
-version = "0.5.2"
+version = "0.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d22475596539443685426b6bdadb926ad0ecaefdfc5fb05e5e3441f15463c511"
+checksum = "13d324164c51f63867b57e73ba5936ea151b8a41a1d23d1031eeb9f70d0236f8"
 dependencies = [
  "bytestring",
+ "cfg-if",
  "http",
  "regex",
+ "regex-lite",
  "serde",
  "tracing",
 ]
@@ -131,9 +133,9 @@ dependencies = [
 
 [[package]]
 name = "actix-web"
-version = "4.5.1"
+version = "4.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "43a6556ddebb638c2358714d853257ed226ece6023ef9364f23f0c70737ea984"
+checksum = "b1cf67dadb19d7c95e5a299e2dda24193b89d5d4f33a3b9800888ede9e19aa32"
 dependencies = [
  "actix-codec",
  "actix-http",
@@ -160,6 +162,7 @@ dependencies = [
  "once_cell",
  "pin-project-lite",
  "regex",
+ "regex-lite",
  "serde",
  "serde_json",
  "serde_urlencoded",
@@ -178,7 +181,7 @@ dependencies = [
  "actix-router",
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -198,9 +201,9 @@ checksum = "f26201604c87b1e01bd3d98f8d5d9a8fcbb815e8cedb41ffccbeb4bf593a35fe"
 
 [[package]]
 name = "ahash"
-version = "0.8.7"
+version = "0.8.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "77c3a9648d43b9cd48db467b3f87fdd6e146bcc88ab0180006cef2179fe11d01"
+checksum = "e89da841a80418a9b391ebaea17f5c112ffaaa96f621d2c285b5174da76b9011"
 dependencies = [
  "cfg-if",
  "getrandom",
@@ -211,9 +214,9 @@ dependencies = [
 
 [[package]]
 name = "aho-corasick"
-version = "1.1.2"
+version = "1.1.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b2969dcb958b36655471fc61f7e416fa76033bdd4bfed0678d8fee1e2d07a1f0"
+checksum = "8e60d3430d3a69478ad0993f19238d2df97c507009a52b3c10addcd7f6bcb916"
 dependencies = [
  "memchr",
 ]
@@ -270,12 +273,12 @@ dependencies = [
  "indexmap",
  "indicatif",
  "insta",
- "itertools",
+ "itertools 0.13.0",
  "log",
  "noodles-bed",
- "noodles-bgzf 0.29.0",
+ "noodles-bgzf",
  "noodles-core",
- "noodles-csi 0.33.0",
+ "noodles-csi",
  "noodles-gff",
  "noodles-tabix",
  "noodles-vcf",
@@ -293,7 +296,7 @@ dependencies = [
  "serde",
  "serde_json",
  "serde_with",
- "strum 0.26.1",
+ "strum 0.26.2",
  "temp_testdir",
  "test-log",
  "thiserror",
@@ -304,47 +307,48 @@ dependencies = [
 
 [[package]]
 name = "anstream"
-version = "0.6.11"
+version = "0.6.14"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6e2e1ebcb11de5c03c67de28a7df593d32191b44939c482e97702baaaa6ab6a5"
+checksum = "418c75fa768af9c03be99d17643f93f79bbba589895012a80e3452a19ddda15b"
 dependencies = [
  "anstyle",
  "anstyle-parse",
  "anstyle-query",
  "anstyle-wincon",
  "colorchoice",
+ "is_terminal_polyfill",
  "utf8parse",
 ]
 
 [[package]]
 name = "anstyle"
-version = "1.0.6"
+version = "1.0.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8901269c6307e8d93993578286ac0edf7f195079ffff5ebdeea6a59ffb7e36bc"
+checksum = "038dfcf04a5feb68e9c60b21c9625a54c2c0616e79b72b0fd87075a056ae1d1b"
 
 [[package]]
 name = "anstyle-parse"
-version = "0.2.3"
+version = "0.2.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c75ac65da39e5fe5ab759307499ddad880d724eed2f6ce5b5e8a26f4f387928c"
+checksum = "c03a11a9034d92058ceb6ee011ce58af4a9bf61491aa7e1e59ecd24bd40d22d4"
 dependencies = [
  "utf8parse",
 ]
 
 [[package]]
 name = "anstyle-query"
-version = "1.0.2"
+version = "1.0.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e28923312444cdd728e4738b3f9c9cac739500909bb3d3c94b43551b16517648"
+checksum = "a64c907d4e79225ac72e2a354c9ce84d50ebb4586dee56c82b3ee73004f537f5"
 dependencies = [
  "windows-sys 0.52.0",
 ]
 
 [[package]]
 name = "anstyle-wincon"
-version = "3.0.2"
+version = "3.0.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1cd54b81ec8d6180e24654d0b371ad22fc3dd083b6ff8ba325b72e00c87660a7"
+checksum = "61a38449feb7068f52bb06c12759005cf459ee52bb4adc1d5a7c4322d716fb19"
 dependencies = [
  "anstyle",
  "windows-sys 0.52.0",
@@ -352,9 +356,9 @@ dependencies = [
 
 [[package]]
 name = "anyhow"
-version = "1.0.80"
+version = "1.0.86"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5ad32ce52e4161730f7098c077cd2ed6229b5804ccf99e5366be1ab72a98b4e1"
+checksum = "b3d1d046238990b9cf5bcde22a3fb3584ee5cf65fb2765f454ed428c7a0063da"
 
 [[package]]
 name = "approx"
@@ -367,15 +371,15 @@ dependencies = [
 
 [[package]]
 name = "autocfg"
-version = "1.1.0"
+version = "1.3.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d468802bab17cbc0cc575e9b053f41e72aa36bfa6b7f55e3529ffa43161b97fa"
+checksum = "0c4b4d0bd25bd0b74681c0ad21497610ce1b7c91b1022cd21c80c6fbdd9476b0"
 
 [[package]]
 name = "backtrace"
-version = "0.3.69"
+version = "0.3.71"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2089b7e3f35b9dd2d0ed921ead4f6d318c27680d4a5bd167b3ee120edb105837"
+checksum = "26b05800d2e817c8b3b4b54abd461726265fa9789ae34330622f2db9ee696f9d"
 dependencies = [
  "addr2line",
  "cc",
@@ -392,6 +396,12 @@ version = "0.21.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "9d297deb1925b89f2ccc13d7635fa0714f12c87adce1c75356b39ca9b7178567"
 
+[[package]]
+name = "base64"
+version = "0.22.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "72b3254f16251a8381aa12e40e3c4d2f0199f8c6508fbecb9d91f575e0fbb8c6"
+
 [[package]]
 name = "bgzip"
 version = "0.3.1"
@@ -406,30 +416,29 @@ dependencies = [
 
 [[package]]
 name = "bindgen"
-version = "0.65.1"
+version = "0.69.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cfdf7b466f9a4903edc73f95d6d2bcd5baf8ae620638762244d3f60143643cc5"
+checksum = "a00dc851838a2120612785d195287475a3ac45514741da670b735818822129a0"
 dependencies = [
- "bitflags 1.3.2",
+ "bitflags",
  "cexpr",
  "clang-sys",
+ "itertools 0.12.1",
  "lazy_static",
  "lazycell",
- "peeking_take_while",
- "prettyplease",
  "proc-macro2",
  "quote",
  "regex",
  "rustc-hash",
  "shlex",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "bio"
-version = "1.5.0"
+version = "1.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "25dccfc5babf5a4f505ab5bdda0e18d4b5fc1600c222677c54992203632cbdf5"
+checksum = "7a72cb93babf08c85b375c2938ac678cc637936b3ebb72266d433cec2577f6c2"
 dependencies = [
  "anyhow",
  "approx",
@@ -442,8 +451,7 @@ dependencies = [
  "editdistancek",
  "enum-map",
  "fxhash",
- "getset",
- "itertools",
+ "itertools 0.11.0",
  "itertools-num",
  "lazy_static",
  "multimap 0.9.1",
@@ -509,15 +517,9 @@ checksum = "349f9b6a179ed607305526ca489b34ad0a41aed5f7980fa90eb03160b69598fb"
 
 [[package]]
 name = "bitflags"
-version = "1.3.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"
-
-[[package]]
-name = "bitflags"
-version = "2.4.2"
+version = "2.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ed570934406eb16438a4e976b1b4500774099c13b8cb96eec99f620f05090ddf"
+checksum = "cf4b9d6a944f767f8e5e0db018570623c85f3d925ac718db4e06d0187adb21c1"
 
 [[package]]
 name = "block-buffer"
@@ -536,9 +538,9 @@ checksum = "c057a3e5631e754d98c5a9e3baa56803fce8fe238b009ecd876e57d381d44c00"
 
 [[package]]
 name = "brotli"
-version = "3.4.0"
+version = "6.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "516074a47ef4bce09577a3b379392300159ce5b1ba2e501ff1c819950066100f"
+checksum = "74f7971dbd9326d58187408ab83117d8ac1bb9c17b085fdacd1cf2f598719b6b"
 dependencies = [
  "alloc-no-stdlib",
  "alloc-stdlib",
@@ -547,19 +549,29 @@ dependencies = [
 
 [[package]]
 name = "brotli-decompressor"
-version = "2.5.1"
+version = "4.0.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4e2e4afe60d7dd600fdd3de8d0f08c2b7ec039712e3b6137ff98b7004e82de4f"
+checksum = "9a45bd2e4095a8b518033b128020dd4a55aab1c0a381ba4404a472630f4bc362"
 dependencies = [
  "alloc-no-stdlib",
  "alloc-stdlib",
 ]
 
+[[package]]
+name = "bstr"
+version = "1.9.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "05efc5cfd9110c8416e471df0e96702d58690178e206e61b7173706673c93706"
+dependencies = [
+ "memchr",
+ "serde",
+]
+
 [[package]]
 name = "bumpalo"
-version = "3.14.0"
+version = "3.16.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7f30e7476521f6f8af1a1c4c0b8cc94f0bee37d91763d0ca2665f299b6cd8aec"
+checksum = "79296716171880943b8470b5f8d03aa55eb2e645a4874bdbb28adb49162e012c"
 
 [[package]]
 name = "bv"
@@ -573,15 +585,15 @@ dependencies = [
 
 [[package]]
 name = "bytecount"
-version = "0.6.7"
+version = "0.6.8"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e1e5f035d16fc623ae5f74981db80a439803888314e3a555fd6f04acd51a3205"
+checksum = "5ce89b21cab1437276d2650d57e971f9d548a2d9037cc231abdc0562b97498ce"
 
 [[package]]
 name = "bytemuck"
-version = "1.14.2"
+version = "1.16.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ea31d69bda4949c1c1562c1e6f042a1caefac98cdc8a298260a2ff41c1e2d42b"
+checksum = "78834c15cb5d5efe3452d58b1e8ba890dd62d21907f867f383358198e56ebca5"
 
 [[package]]
 name = "byteorder"
@@ -591,9 +603,9 @@ checksum = "1fd0f2584146f6f2ef48085050886acf353beff7305ebd1ae69500e27c67f64b"
 
 [[package]]
 name = "bytes"
-version = "1.5.0"
+version = "1.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a2bd12c1caf447e69cd4528f47f94d203fd2582878ecb9e9465484c4148a8223"
+checksum = "514de17de45fdb8dc022b1a7975556c53c86f9f0aa5f534b98977b171857c2c9"
 
 [[package]]
 name = "bytestring"
@@ -617,12 +629,13 @@ dependencies = [
 
 [[package]]
 name = "cc"
-version = "1.0.83"
+version = "1.0.98"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f1174fb0b6ec23863f8b971027804a42614e347eafb0a95bf0b12cdae21fc4d0"
+checksum = "41c270e7540d725e65ac7f1b212ac8ce349719624d7bcff99f8e2e488e8cf03f"
 dependencies = [
  "jobserver",
  "libc",
+ "once_cell",
 ]
 
 [[package]]
@@ -652,14 +665,14 @@ dependencies = [
  "num-traits",
  "serde",
  "wasm-bindgen",
- "windows-targets 0.52.0",
+ "windows-targets 0.52.5",
 ]
 
 [[package]]
 name = "clang-sys"
-version = "1.7.0"
+version = "1.8.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "67523a3b4be3ce1989d607a828d036249522dd9c1c8de7f4dd2dae43a37369d1"
+checksum = "a483f3cbf7cec2e153d424d0e92329d816becc6421389bd494375c6065921b9b"
 dependencies = [
  "glob",
  "libc",
@@ -695,7 +708,7 @@ dependencies = [
  "anstream",
  "anstyle",
  "clap_lex",
- "strsim 0.11.0",
+ "strsim",
 ]
 
 [[package]]
@@ -707,7 +720,7 @@ dependencies = [
  "heck 0.5.0",
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -718,9 +731,9 @@ checksum = "98cc8fbded0c607b7ba9dd60cd98df59af97e84d24e49c8557331cfc26d301ce"
 
 [[package]]
 name = "colorchoice"
-version = "1.0.0"
+version = "1.0.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "acbf1af155f9b9ef647e42cdc158db4b64a1b61f743629225fde6f3e0be2a7c7"
+checksum = "0b6a852b24ab71dffc585bcb46eaf7959d175cb865a7152e35b348d1b2960422"
 
 [[package]]
 name = "console"
@@ -769,18 +782,18 @@ dependencies = [
 
 [[package]]
 name = "crc32fast"
-version = "1.3.2"
+version = "1.4.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b540bd8bc810d3885c6ea91e2018302f68baba2129ab3e88f32389ee9370880d"
+checksum = "a97769d94ddab943e4510d138150169a2758b5ef3eb191a9ee688de3e23ef7b3"
 dependencies = [
  "cfg-if",
 ]
 
 [[package]]
 name = "crossbeam-channel"
-version = "0.5.11"
+version = "0.5.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "176dc175b78f56c0f321911d9c8eb2b77a78a4860b9c19db83835fea1a46649b"
+checksum = "33480d6946193aa8033910124896ca395333cae7e2d1113d1fef6c3272217df2"
 dependencies = [
  "crossbeam-utils",
 ]
@@ -806,9 +819,9 @@ dependencies = [
 
 [[package]]
 name = "crossbeam-utils"
-version = "0.8.19"
+version = "0.8.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "248e3bacc7dc6baa3b21e405ee045c3047101a49145e7e9eca583ab4c2ca5345"
+checksum = "22ec99545bb0ed0ea7bb9b8e1e9122ea386ff8a48c0922e43f36d45ab09e0e80"
 
 [[package]]
 name = "crypto-common"
@@ -849,9 +862,9 @@ checksum = "ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9"
 
 [[package]]
 name = "darling"
-version = "0.20.5"
+version = "0.20.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fc5d6b04b3fd0ba9926f945895de7d806260a2d7431ba82e7edaecb043c4c6b8"
+checksum = "83b2eb4d90d12bdda5ed17de686c2acb4c57914f8f921b8da7e112b5a36f3fe1"
 dependencies = [
  "darling_core",
  "darling_macro",
@@ -859,27 +872,27 @@ dependencies = [
 
 [[package]]
 name = "darling_core"
-version = "0.20.5"
+version = "0.20.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "04e48a959bcd5c761246f5d090ebc2fbf7b9cd527a492b07a67510c108f1e7e3"
+checksum = "622687fe0bac72a04e5599029151f5796111b90f1baaa9b544d807a5e31cd120"
 dependencies = [
  "fnv",
  "ident_case",
  "proc-macro2",
  "quote",
- "strsim 0.10.0",
- "syn 2.0.48",
+ "strsim",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "darling_macro"
-version = "0.20.5"
+version = "0.20.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1d1545d67a2149e1d93b7e5c7752dce5a7426eb5d1357ddcfd89336b94444f77"
+checksum = "733cabb43482b1a1b53eee8583c2b9e8684d592215ea83efd305dd31bc2f0178"
 dependencies = [
  "darling_core",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -939,9 +952,9 @@ checksum = "3e02df23d5b1c6f9e69fa603b890378123b93073df998a21e6e33b9db0a32613"
 
 [[package]]
 name = "either"
-version = "1.9.0"
+version = "1.12.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a26ae43d7bcc3b814de94796a5e736d4029efb0ee900c12e2d54c993ad1a1e07"
+checksum = "3dca9240753cf90908d7e4aac30f630662b02aebaa1b58a3cadabdb23385b58b"
 
 [[package]]
 name = "encode_unicode"
@@ -951,9 +964,9 @@ checksum = "a357d28ed41a50f9c765dbfe56cbc04a64e53e5fc58ba79fbc34c10ef3df831f"
 
 [[package]]
 name = "encoding_rs"
-version = "0.8.33"
+version = "0.8.34"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7268b386296a025e474d5140678f75d6de9493ae55a5d709eeb9dd08149945e1"
+checksum = "b45de904aa0b010bce2ab45264d0631681847fa7b6f2eaa7dab7619943bc4f59"
 dependencies = [
  "cfg-if",
 ]
@@ -976,7 +989,7 @@ checksum = "f282cfdfe92516eb26c2af8589c274c7c17681f5ecc03c18255fe741c6aa64eb"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -1010,18 +1023,19 @@ checksum = "5443807d6dff69373d433ab9ef5378ad8df50ca6298caf15de6e52e24aaf54d5"
 
 [[package]]
 name = "erased-serde"
-version = "0.4.2"
+version = "0.4.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "55d05712b2d8d88102bc9868020c9e5c7a1f5527c452b9b97450a1d006140ba7"
+checksum = "24e2389d65ab4fab27dc2a5de7b191e1f6617d1f1c8855c0dc569c94a4cbb18d"
 dependencies = [
  "serde",
+ "typeid",
 ]
 
 [[package]]
 name = "errno"
-version = "0.3.8"
+version = "0.3.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a258e46cdc063eb8519c00b9fc845fc47bcfca4130e2f08e88665ceda8474245"
+checksum = "534c5cf6194dfab3db3242765c03bbe257cf92f22b38f6bc0c58d59108a820ba"
 dependencies = [
  "libc",
  "windows-sys 0.52.0",
@@ -1029,9 +1043,9 @@ dependencies = [
 
 [[package]]
 name = "fastrand"
-version = "2.0.1"
+version = "2.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "25cbce373ec4653f1a01a31e8a5e5ec0c622dc27ff9c4e6606eefef5cbbed4a5"
+checksum = "9fc0510504f03c51ada170672ac806f1f105a88aa97a5281117e1ddc3368e51a"
 
 [[package]]
 name = "feature-probe"
@@ -1047,9 +1061,9 @@ checksum = "0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80"
 
 [[package]]
 name = "flate2"
-version = "1.0.28"
+version = "1.0.30"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "46303f565772937ffe1d394a4fac6f411c6013172fadde9dcdb1e147a086940e"
+checksum = "5f54427cfd1c7829e2a139fcefea601bf088ebca651d2bf53ebc600eac295dae"
 dependencies = [
  "crc32fast",
  "miniz_oxide",
@@ -1126,7 +1140,7 @@ checksum = "87750cf4b7a4c0625b1529e4c543c2182106e4dedc60a2a6455e00d212c489ac"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -1143,9 +1157,9 @@ checksum = "38d84fa142264698cdce1a9f9172cf383a0c82de1bddcf3092901442c4097004"
 
 [[package]]
 name = "futures-timer"
-version = "3.0.2"
+version = "3.0.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e64b03909df88034c26dc1547e8970b91f98bdb65165d6a4e9110d94263dbb2c"
+checksum = "f288b0a4f20f9a56b5d1da57e2227c661b7b16168e2f72365f57b63326e29b24"
 
 [[package]]
 name = "futures-util"
@@ -1186,27 +1200,15 @@ dependencies = [
 
 [[package]]
 name = "getrandom"
-version = "0.2.12"
+version = "0.2.15"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "190092ea657667030ac6a35e305e62fc4dd69fd98ac98631e5d3a2b1575a12b5"
+checksum = "c4567c8db10ae91089c99af84c68c38da3ec2f087c3f82960bcdbf3656b6f4d7"
 dependencies = [
  "cfg-if",
  "libc",
  "wasi",
 ]
 
-[[package]]
-name = "getset"
-version = "0.1.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e45727250e75cc04ff2846a66397da8ef2b3db8e40e0cef4df67950a07621eb9"
-dependencies = [
- "proc-macro-error",
- "proc-macro2",
- "quote",
- "syn 1.0.109",
-]
-
 [[package]]
 name = "gimli"
 version = "0.28.1"
@@ -1221,9 +1223,9 @@ checksum = "d2fabcfbdc87f4758337ca535fb41a6d701b65693ce38287d856d1674551ec9b"
 
 [[package]]
 name = "h2"
-version = "0.3.24"
+version = "0.3.26"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bb2c4422095b67ee78da96fbb51a4cc413b3b25883c7717ff7ca1ab31022c9c9"
+checksum = "81fe527a889e1532da5c525686d96d4c2e74cdd345badf8dfef9f6b39dd5f5e8"
 dependencies = [
  "bytes",
  "fnv",
@@ -1240,9 +1242,9 @@ dependencies = [
 
 [[package]]
 name = "hashbrown"
-version = "0.14.3"
+version = "0.14.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "290f1a1d9242c78d09ce40a5e87e7554ee637af1351968159f4952f028f75604"
+checksum = "e5274423e17b7c9fc20b6e7e208532f9b19825d82dfd615708b70edd83df41f1"
 
 [[package]]
 name = "heck"
@@ -1262,20 +1264,11 @@ version = "0.4.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "7f24254aa9a54b5c858eaee2f5bccdb46aaf0e486a595ed5fd8f86ba55232a70"
 
-[[package]]
-name = "home"
-version = "0.5.9"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e3d1354bf6b7235cb4a0576c2619fd4ed18183f689b12b006a0ee7329eeff9a5"
-dependencies = [
- "windows-sys 0.52.0",
-]
-
 [[package]]
 name = "http"
-version = "0.2.11"
+version = "0.2.12"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8947b1a6fad4393052c7ba1f4cd97bed3e953a95c79c92ad9b051a04611d9fbb"
+checksum = "601cbb57e577e2f5ef5be8e7b83f0f63994f25aa94d673e54a92d5c516d101f1"
 dependencies = [
  "bytes",
  "fnv",
@@ -1366,27 +1359,32 @@ dependencies = [
 
 [[package]]
 name = "insta"
-version = "1.36.1"
+version = "1.39.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0a7c22c4d34ef4788c351e971c52bfdfe7ea2766f8c5466bc175dd46e52ac22e"
+checksum = "810ae6042d48e2c9e9215043563a58a80b877bc863228a74cf10c49d4620a6f5"
 dependencies = [
  "console",
  "lazy_static",
  "linked-hash-map",
  "serde",
  "similar",
- "yaml-rust",
 ]
 
 [[package]]
 name = "instant"
-version = "0.1.12"
+version = "0.1.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7a5bbe824c507c5da5956355e86a746d82e0e1464f65d862cc5e71da70e94b2c"
+checksum = "e0242819d153cba4b4b05a5a8f2a7e9bbf97b6055b2a002b395c96b5ff3c0222"
 dependencies = [
  "cfg-if",
 ]
 
+[[package]]
+name = "is_terminal_polyfill"
+version = "1.70.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "f8478577c03552c21db0e2724ffb8986a5ce7af88107e6be5d2ee6e158c12800"
+
 [[package]]
 name = "itertools"
 version = "0.11.0"
@@ -1396,6 +1394,24 @@ dependencies = [
  "either",
 ]
 
+[[package]]
+name = "itertools"
+version = "0.12.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ba291022dbbd398a455acf126c1e341954079855bc60dfdda641363bd6922569"
+dependencies = [
+ "either",
+]
+
+[[package]]
+name = "itertools"
+version = "0.13.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "413ee7dfc52ee1a4949ceeb7dbc8a33f2d6c088194d9f922fb8318faf1f01186"
+dependencies = [
+ "either",
+]
+
 [[package]]
 name = "itertools-num"
 version = "0.1.3"
@@ -1407,24 +1423,24 @@ dependencies = [
 
 [[package]]
 name = "itoa"
-version = "1.0.10"
+version = "1.0.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b1a46d1a171d865aa5f83f92695765caa047a9b4cbae2cbf37dbd613a793fd4c"
+checksum = "49f1f14873335454500d59611f1cf4a4b0f786f9ac11f4312a78e4cf2566695b"
 
 [[package]]
 name = "jobserver"
-version = "0.1.28"
+version = "0.1.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ab46a6e9526ddef3ae7f787c06f0f2600639ba80ea3eade3d8e670a2230f51d6"
+checksum = "d2b099aaa34a9751c5bf0878add70444e1ed2dd73f347be99003d4577277de6e"
 dependencies = [
  "libc",
 ]
 
 [[package]]
 name = "js-sys"
-version = "0.3.68"
+version = "0.3.69"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "406cda4b368d531c842222cf9d2600a9a4acce8d29423695379c6868a143a9ee"
+checksum = "29c15563dc2726973df627357ce0c9ddddbea194836909d655df6a75d2cf296d"
 dependencies = [
  "wasm-bindgen",
 ]
@@ -1449,18 +1465,18 @@ checksum = "830d08ce1d1d941e6b30645f1a0eb5643013d835ce3779a5fc208261dbe10f55"
 
 [[package]]
 name = "libc"
-version = "0.2.153"
+version = "0.2.155"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9c198f91728a82281a64e1f4f9eeb25d82cb32a5de251c6bd1b5154d63a8e7bd"
+checksum = "97b3888a4aecf77e811145cadf6eef5901f4782c53886191b2f693f24761847c"
 
 [[package]]
 name = "libloading"
-version = "0.8.1"
+version = "0.8.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c571b676ddfc9a8c12f1f3d3085a7b163966a8fd8098a90640953ce5f6170161"
+checksum = "0c2a198fb6b0eada2a8df47933734e6d35d350665a33a3593d7164fa52c75c19"
 dependencies = [
  "cfg-if",
- "windows-sys 0.48.0",
+ "windows-targets 0.52.5",
 ]
 
 [[package]]
@@ -1471,9 +1487,9 @@ checksum = "4ec2a862134d2a7d32d7983ddcdd1c4923530833c9f2ea1a44fc5fa473989058"
 
 [[package]]
 name = "librocksdb-sys"
-version = "0.11.0+8.1.1"
+version = "0.16.0+8.10.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d3386f101bcb4bd252d8e9d2fb41ec3b0862a15a62b478c355b2982efa469e3e"
+checksum = "ce3d60bc059831dc1c83903fb45c103f75db65c5a7bf22272764d9cc683e348c"
 dependencies = [
  "bindgen",
  "bzip2-sys",
@@ -1487,9 +1503,9 @@ dependencies = [
 
 [[package]]
 name = "libz-sys"
-version = "1.1.15"
+version = "1.1.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "037731f5d3aaa87a5675e895b63ddff1a87624bc29f77004ea829809654e48f6"
+checksum = "c15da26e5af7e25c90b37a2d75cdbf940cf4a55316de9d84c679c9b8bfabf82e"
 dependencies = [
  "cc",
  "pkg-config",
@@ -1504,9 +1520,9 @@ checksum = "0717cef1bc8b636c6e1c1bbdefc09e6322da8a9321966e8928ef80d20f7f770f"
 
 [[package]]
 name = "linux-raw-sys"
-version = "0.4.13"
+version = "0.4.14"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "01cda141df6706de531b6c46c3a33ecca755538219bd484262fa09410c13539c"
+checksum = "78b3ae25bc7c8c38cec158d1f2757ee79e9b3740fbc7ccf0e59e4b08d793fa89"
 
 [[package]]
 name = "local-channel"
@@ -1527,9 +1543,9 @@ checksum = "4d873d7c67ce09b42110d801813efbc9364414e356be9935700d368351657487"
 
 [[package]]
 name = "lock_api"
-version = "0.4.11"
+version = "0.4.12"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3c168f8615b12bc01f9c17e2eb0cc07dcae1940121185446edc3744920e8ef45"
+checksum = "07af8b9cdd281b7915f413fa73f29ebd5d55d0d3f0155584dade1ff18cea1b17"
 dependencies = [
  "autocfg",
  "scopeguard",
@@ -1572,9 +1588,9 @@ dependencies = [
 
 [[package]]
 name = "memchr"
-version = "2.7.1"
+version = "2.7.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "523dc4f511e55ab87b694dc30d0f820d60906ef06413f93d4d7a1385599cc149"
+checksum = "6c8640c5d730cb13ebd907d8d04b52f55ac9a2eec55b440c8892f40d56c76c1d"
 
 [[package]]
 name = "mime"
@@ -1590,18 +1606,18 @@ checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
 
 [[package]]
 name = "miniz_oxide"
-version = "0.7.2"
+version = "0.7.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9d811f3e15f28568be3407c8e7fdb6514c1cda3cb30683f15b6a1a1dc4ea14a7"
+checksum = "87dfd01fe195c66b572b37921ad8803d010623c0aca821bea2302239d155cdae"
 dependencies = [
  "adler",
 ]
 
 [[package]]
 name = "mio"
-version = "0.8.10"
+version = "0.8.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8f3d0b296e374a4e6f3c7b0a1f5a51d748a0d34c85e7dc48fc3fa9a87657fe09"
+checksum = "a4a650543ca06a924e8b371db273b2756685faae30f8487da1b56505a8f78b0c"
 dependencies = [
  "libc",
  "log",
@@ -1609,12 +1625,6 @@ dependencies = [
  "windows-sys 0.48.0",
 ]
 
-[[package]]
-name = "multimap"
-version = "0.8.3"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e5ce46fe64a9d73be07dcbe690a38ce1b293be448fd8ce1e6c1b8062c9f72c6a"
-
 [[package]]
 name = "multimap"
 version = "0.9.1"
@@ -1624,6 +1634,12 @@ dependencies = [
  "serde",
 ]
 
+[[package]]
+name = "multimap"
+version = "0.10.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "defc4c55412d89136f966bbb339008b474350e5e6e78d2714439c386b3137a03"
+
 [[package]]
 name = "nalgebra"
 version = "0.29.0"
@@ -1687,30 +1703,18 @@ dependencies = [
 
 [[package]]
 name = "noodles-bed"
-version = "0.12.0"
+version = "0.13.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c116ff14e3dd3ffa6c58771d1a2ee1205690e1c0fe78b0a3456402eebf44ad27"
+checksum = "57cdbb2ee5fce84ca241d9bafba8554aadf2ccc534f7ebb71e1c646e259b187c"
 dependencies = [
  "noodles-core",
 ]
 
 [[package]]
 name = "noodles-bgzf"
-version = "0.26.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8970db2e84adb1007377dd3988258d7a64e3fc4c05602ebf94e1f8cba207c030"
-dependencies = [
- "byteorder",
- "bytes",
- "crossbeam-channel",
- "flate2",
-]
-
-[[package]]
-name = "noodles-bgzf"
-version = "0.29.0"
+version = "0.30.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7dba1c82e9f92c00b23538359e5d191dff7ccb300cf659ee3a835af65c3cd143"
+checksum = "13f54d4840fd26ed94103ded9524aa5fdd757255a556f24653d162c0a45c47e8"
 dependencies = [
  "byteorder",
  "bytes",
@@ -1720,74 +1724,64 @@ dependencies = [
 
 [[package]]
 name = "noodles-core"
-version = "0.14.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7336c3be652de4e05444c9b12a32331beb5ba3316e8872d92bfdd8ef3b06c282"
-
-[[package]]
-name = "noodles-csi"
-version = "0.30.0"
+version = "0.15.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a60dfe0919f7ecbd081a82eb1d32e8f89f9041932d035fe8309073c8c01277bf"
+checksum = "c5a8c6b020d1205abef2b0fab4463a6c5ecc3c8f4d561ca8b0d1a42323376200"
 dependencies = [
- "bit-vec",
- "byteorder",
- "indexmap",
- "noodles-bgzf 0.26.0",
- "noodles-core",
+ "bstr",
 ]
 
 [[package]]
 name = "noodles-csi"
-version = "0.33.0"
+version = "0.35.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "857fcce273172c7ec188369c0e745e95aefc477a67262133862c9ef3375e56b9"
+checksum = "beb1618ca2aa88662d387197a188686105d6b5e25f6959c52b766276cbfc4620"
 dependencies = [
  "bit-vec",
  "byteorder",
  "indexmap",
- "noodles-bgzf 0.29.0",
+ "noodles-bgzf",
  "noodles-core",
 ]
 
 [[package]]
 name = "noodles-gff"
-version = "0.27.0"
+version = "0.33.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "14f8ec87fe3630f57d6d8ea24cbc2cbd0bfed1fe66238bda7a7c3fb6a36d3713"
+checksum = "578b6efaf5c3f029720af4c8590e34fd38e214666971d665a52e3566830170d0"
 dependencies = [
  "indexmap",
- "noodles-bgzf 0.26.0",
+ "noodles-bgzf",
  "noodles-core",
- "noodles-csi 0.30.0",
+ "noodles-csi",
  "percent-encoding",
 ]
 
 [[package]]
 name = "noodles-tabix"
-version = "0.39.0"
+version = "0.41.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "778b5a8cfbe846c7239cdd9f3ba7b9e46a4d46d957822051ae16680713bbd028"
+checksum = "0cc110f78cb406f69f42c482d1986526c590b7295f37f0e37f1fc380413400ef"
 dependencies = [
  "bit-vec",
  "byteorder",
  "indexmap",
- "noodles-bgzf 0.29.0",
+ "noodles-bgzf",
  "noodles-core",
- "noodles-csi 0.33.0",
+ "noodles-csi",
 ]
 
 [[package]]
 name = "noodles-vcf"
-version = "0.55.0"
+version = "0.57.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ad890dd39fe923d22112ed0c90ed9835b2c196d6a4e711b20a007852ed63ced9"
+checksum = "4df6e162ec2e898581b5ccf5e8972e376a7c41807061b66152280dea2c53a989"
 dependencies = [
  "indexmap",
  "memchr",
- "noodles-bgzf 0.29.0",
+ "noodles-bgzf",
  "noodles-core",
- "noodles-csi 0.33.0",
+ "noodles-csi",
  "noodles-tabix",
  "percent-encoding",
 ]
@@ -1804,9 +1798,9 @@ dependencies = [
 
 [[package]]
 name = "num-complex"
-version = "0.4.5"
+version = "0.4.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "23c6602fda94a57c990fe0df199a035d83576b496aa29f4e634a8ac6004e68a6"
+checksum = "73f88a1307638156682bada9d7604135552957b7818057dcef22705b4d509495"
 dependencies = [
  "num-traits",
 ]
@@ -1828,20 +1822,19 @@ dependencies = [
 
 [[package]]
 name = "num-rational"
-version = "0.4.1"
+version = "0.4.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0638a1c9d0a3c0914158145bc76cff373a75a627e6ecbfb71cbe6f453a5a19b0"
+checksum = "f83d14da390562dca69fc84082e73e548e1ad308d24accdedd2720017cb37824"
 dependencies = [
- "autocfg",
  "num-integer",
  "num-traits",
 ]
 
 [[package]]
 name = "num-traits"
-version = "0.2.18"
+version = "0.2.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "da0df0e5185db44f69b44f26786fe401b6c293d1907744beaa7fa62b2e5a517a"
+checksum = "071dfc062690e90b734c0b2273ce72ad0ffa95f0c74596bc250dcfd960262841"
 dependencies = [
  "autocfg",
  "libm",
@@ -1885,9 +1878,9 @@ checksum = "b15813163c1d831bf4a13c3610c05c0d03b39feb07f7e09fa234dac9b15aaf39"
 
 [[package]]
 name = "parking_lot"
-version = "0.12.1"
+version = "0.12.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3742b2c103b9f06bc9fff0a37ff4912935851bee6d36f3c02bcc755bcfec228f"
+checksum = "f1bf18183cf54e8d6059647fc3063646a1801cf30896933ec2311622cc4b9a27"
 dependencies = [
  "lock_api",
  "parking_lot_core",
@@ -1895,22 +1888,22 @@ dependencies = [
 
 [[package]]
 name = "parking_lot_core"
-version = "0.9.9"
+version = "0.9.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4c42a9226546d68acdd9c0a280d17ce19bfe27a46bf68784e4066115788d008e"
+checksum = "1e401f977ab385c9e4e3ab30627d6f26d00e2c73eef317493c4ec6d468726cf8"
 dependencies = [
  "cfg-if",
  "libc",
  "redox_syscall",
  "smallvec",
- "windows-targets 0.48.5",
+ "windows-targets 0.52.5",
 ]
 
 [[package]]
 name = "paste"
-version = "1.0.14"
+version = "1.0.15"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "de3145af08024dea9fa9914f381a17b8fc6034dfb00f3a84013f7ff43f29ed4c"
+checksum = "57c0d7b74b563b49d38dae00a0c37d4d6de9b432382b2892f0574ddcae73fd0a"
 
 [[package]]
 name = "pbjson"
@@ -1918,7 +1911,7 @@ version = "0.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "1030c719b0ec2a2d25a5df729d6cff1acf3cc230bf766f4f97833591f7577b90"
 dependencies = [
- "base64",
+ "base64 0.21.7",
  "serde",
 ]
 
@@ -1929,7 +1922,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2580e33f2292d34be285c5bc3dba5259542b083cfad6037b6d70345f24dcb735"
 dependencies = [
  "heck 0.4.1",
- "itertools",
+ "itertools 0.11.0",
  "prost",
  "prost-types",
 ]
@@ -1949,12 +1942,6 @@ dependencies = [
  "serde",
 ]
 
-[[package]]
-name = "peeking_take_while"
-version = "0.1.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "19b17cddbe7ec3f8bc800887bab5e717348c95ea2ca0b1bf0837fb964dc67099"
-
 [[package]]
 name = "percent-encoding"
 version = "2.3.1"
@@ -1963,9 +1950,9 @@ checksum = "e3148f5046208a5d56bcfc03053e3ca6334e51da8dfb19b6cdc8b306fae3283e"
 
 [[package]]
 name = "petgraph"
-version = "0.6.4"
+version = "0.6.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e1d3afd2628e69da2be385eb6f2fd57c8ac7977ceeff6dc166ff1657b0e386a9"
+checksum = "b4c5cc86750666a3ed20bdaf5ca2a0344f9c67674cae0515bec2da16fbaa47db"
 dependencies = [
  "fixedbitset",
  "indexmap",
@@ -1973,9 +1960,9 @@ dependencies = [
 
 [[package]]
 name = "pin-project-lite"
-version = "0.2.13"
+version = "0.2.14"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8afb450f006bf6385ca15ef45d71d2288452bc3683ce2e2cacc0d18e4be60b58"
+checksum = "bda66fc9667c18cb2758a2ac84d1167245054bcf85d5d1aaa6923f45801bdd02"
 
 [[package]]
 name = "pin-utils"
@@ -1985,9 +1972,9 @@ checksum = "8b870d8c151b6f2fb93e84a13146138f05d02ed11c7e7c54f8826aaaf7c9f184"
 
 [[package]]
 name = "pkg-config"
-version = "0.3.29"
+version = "0.3.30"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2900ede94e305130c13ddd391e0ab7cbaeb783945ae07a279c268cb05109c6cb"
+checksum = "d231b230927b5e4ad203db57bbcbee2802f6bce620b1e4a9024a07d94e2907ec"
 
 [[package]]
 name = "portable-atomic"
@@ -2019,52 +2006,28 @@ dependencies = [
 
 [[package]]
 name = "prettyplease"
-version = "0.2.16"
+version = "0.2.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a41cf62165e97c7f814d2221421dbb9afcbcdb0a88068e5ea206e19951c2cbb5"
+checksum = "5f12335488a2f3b0a83b14edad48dca9879ce89b2edd10e80237e4e852dd645e"
 dependencies = [
  "proc-macro2",
- "syn 2.0.48",
-]
-
-[[package]]
-name = "proc-macro-error"
-version = "1.0.4"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "da25490ff9892aab3fcf7c36f08cfb902dd3e71ca0f9f9517bea02a73a5ce38c"
-dependencies = [
- "proc-macro-error-attr",
- "proc-macro2",
- "quote",
- "syn 1.0.109",
- "version_check",
-]
-
-[[package]]
-name = "proc-macro-error-attr"
-version = "1.0.4"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a1be40180e52ecc98ad80b184934baf3d0d29f979574e439af5a55274b35f869"
-dependencies = [
- "proc-macro2",
- "quote",
- "version_check",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "proc-macro2"
-version = "1.0.78"
+version = "1.0.84"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e2422ad645d89c99f8f3e6b88a9fdeca7fabeac836b1002371c4367c8f984aae"
+checksum = "ec96c6a92621310b51366f1e28d05ef11489516e93be030060e5fc12024a49d6"
 dependencies = [
  "unicode-ident",
 ]
 
 [[package]]
 name = "prost"
-version = "0.12.3"
+version = "0.12.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "146c289cda302b98a28d40c8b3b90498d6e526dd24ac2ecea73e4e491685b94a"
+checksum = "deb1435c188b76130da55f17a466d252ff7b1418b2ad3e037d127b94e3411f29"
 dependencies = [
  "bytes",
  "prost-derive",
@@ -2072,53 +2035,52 @@ dependencies = [
 
 [[package]]
 name = "prost-build"
-version = "0.12.3"
+version = "0.12.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c55e02e35260070b6f716a2423c2ff1c3bb1642ddca6f99e1f26d06268a0e2d2"
+checksum = "22505a5c94da8e3b7c2996394d1c933236c4d743e81a410bcca4e6989fc066a4"
 dependencies = [
  "bytes",
- "heck 0.4.1",
- "itertools",
+ "heck 0.5.0",
+ "itertools 0.12.1",
  "log",
- "multimap 0.8.3",
+ "multimap 0.10.0",
  "once_cell",
  "petgraph",
  "prettyplease",
  "prost",
  "prost-types",
  "regex",
- "syn 2.0.48",
+ "syn 2.0.66",
  "tempfile",
- "which",
 ]
 
 [[package]]
 name = "prost-derive"
-version = "0.12.3"
+version = "0.12.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "efb6c9a1dd1def8e2124d17e83a20af56f1570d6c2d2bd9e266ccb768df3840e"
+checksum = "81bddcdb20abf9501610992b6759a4c888aef7d1a7247ef75e2404275ac24af1"
 dependencies = [
  "anyhow",
- "itertools",
+ "itertools 0.12.1",
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "prost-types"
-version = "0.12.3"
+version = "0.12.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "193898f59edcf43c26227dcd4c8427f00d99d61e95dcde58dabd49fa291d470e"
+checksum = "9091c90b0a32608e984ff2fa4091273cbdd755d54935c51d520887f4a1dbd5b0"
 dependencies = [
  "prost",
 ]
 
 [[package]]
 name = "quote"
-version = "1.0.35"
+version = "1.0.36"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "291ec9ab5efd934aaf503a6466c5d5251535d108ee747472c3977cc5acc868ef"
+checksum = "0fa76aaf39101c457836aec0ce2316dbdc3ab723cdda1c6bd4e6ad4208acaca7"
 dependencies = [
  "proc-macro2",
 ]
@@ -2171,9 +2133,9 @@ checksum = "60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3"
 
 [[package]]
 name = "rayon"
-version = "1.8.1"
+version = "1.10.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fa7237101a77a10773db45d62004a272517633fbcc3df19d96455ede1122e051"
+checksum = "b418a60154510ca1a002a752ca9714984e21e4241e804d32555251faf8b78ffa"
 dependencies = [
  "either",
  "rayon-core",
@@ -2191,23 +2153,23 @@ dependencies = [
 
 [[package]]
 name = "redox_syscall"
-version = "0.4.1"
+version = "0.5.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4722d768eff46b75989dd134e5c353f0d6296e5aaa3132e776cbdb56be7731aa"
+checksum = "469052894dcb553421e483e4209ee581a45100d31b4018de03e5a7ad86374a7e"
 dependencies = [
- "bitflags 1.3.2",
+ "bitflags",
 ]
 
 [[package]]
 name = "regex"
-version = "1.10.3"
+version = "1.10.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b62dbe01f0b06f9d8dc7d49e05a0785f153b00b2c227856282f671e0318c9b15"
+checksum = "c117dbdfde9c8308975b6a18d71f3f385c89461f7b3fb054288ecf2a2058ba4c"
 dependencies = [
  "aho-corasick",
  "memchr",
- "regex-automata 0.4.5",
- "regex-syntax 0.8.2",
+ "regex-automata 0.4.6",
+ "regex-syntax 0.8.3",
 ]
 
 [[package]]
@@ -2221,15 +2183,21 @@ dependencies = [
 
 [[package]]
 name = "regex-automata"
-version = "0.4.5"
+version = "0.4.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5bb987efffd3c6d0d8f5f89510bb458559eab11e4f869acb20bf845e016259cd"
+checksum = "86b83b8b9847f9bf95ef68afb0b8e6cdb80f498442f5179a29fad448fcc1eaea"
 dependencies = [
  "aho-corasick",
  "memchr",
- "regex-syntax 0.8.2",
+ "regex-syntax 0.8.3",
 ]
 
+[[package]]
+name = "regex-lite"
+version = "0.1.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "30b661b2f27137bdbc16f00eda72866a92bb28af1753ffbd56744fb6e2e9cd8e"
+
 [[package]]
 name = "regex-syntax"
 version = "0.6.29"
@@ -2238,21 +2206,21 @@ checksum = "f162c6dd7b008981e4d40210aca20b4bd0f9b60ca9271061b07f78537722f2e1"
 
 [[package]]
 name = "regex-syntax"
-version = "0.8.2"
+version = "0.8.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c08c74e62047bb2de4ff487b251e4a92e24f48745648451635cec7d591162d9f"
+checksum = "adad44e29e4c806119491a7f06f03de4d1af22c3a680dd47f1e6e179439d1f56"
 
 [[package]]
 name = "relative-path"
-version = "1.9.2"
+version = "1.9.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e898588f33fdd5b9420719948f9f2a32c922a246964576f71ba7f24f80610fbc"
+checksum = "ba39f3699c378cd8970968dcbff9c43159ea4cfbd88d43c00b22f2ef10a435d2"
 
 [[package]]
 name = "rocksdb"
-version = "0.21.0"
+version = "0.22.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bb6f170a4041d50a0ce04b0d2e14916d6ca863ea2e422689a5b694395d299ffe"
+checksum = "6bd13e55d6d7b8cd0ea569161127567cd587676c99f4472f779a0279aa60a7a7"
 dependencies = [
  "libc",
  "librocksdb-sys",
@@ -2260,9 +2228,9 @@ dependencies = [
 
 [[package]]
 name = "rocksdb-utils-lookup"
-version = "0.3.0"
+version = "0.4.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b83002edb508bf7fc5b234bde1489ccaea5bffbaeaf0aae00270257c858b5f9f"
+checksum = "cfdff1c5ed63d35ce75ffc688318b3b9791c5e16a0c4b1ed8d8400149384f7bf"
 dependencies = [
  "rocksdb",
  "thiserror",
@@ -2271,9 +2239,9 @@ dependencies = [
 
 [[package]]
 name = "rstest"
-version = "0.18.2"
+version = "0.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "97eeab2f3c0a199bc4be135c36c924b6590b88c377d416494288c14f2db30199"
+checksum = "9d5316d2a1479eeef1ea21e7f9ddc67c191d497abc8fc3ba2467857abbb68330"
 dependencies = [
  "futures",
  "futures-timer",
@@ -2283,9 +2251,9 @@ dependencies = [
 
 [[package]]
 name = "rstest_macros"
-version = "0.18.2"
+version = "0.19.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d428f8247852f894ee1be110b375111b586d4fa431f6c46e64ba5a0dcccbe605"
+checksum = "04a9df72cc1f67020b0d63ad9bfe4a323e459ea7eb68e03bd9824db49f9a4c25"
 dependencies = [
  "cfg-if",
  "glob",
@@ -2294,21 +2262,21 @@ dependencies = [
  "regex",
  "relative-path",
  "rustc_version 0.4.0",
- "syn 2.0.48",
+ "syn 2.0.66",
  "unicode-ident",
 ]
 
 [[package]]
 name = "rustc-demangle"
-version = "0.1.23"
+version = "0.1.24"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d626bb9dae77e28219937af045c257c28bfd3f69333c512553507f5f9798cb76"
+checksum = "719b953e2095829ee67db738b3bfa9fa368c94900df327b3f07fe6e794d2fe1f"
 
 [[package]]
 name = "rustc-hash"
-version = "1.1.0"
+version = "1.2.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "08d43f7aa6b08d49f382cde6a7982047c3426db949b1424bc4b7ec9ae12c6ce2"
+checksum = "3450ed37fe9609abb6bc3b8891b6e078404e4c53c7332350e2e15126a95229bf"
 
 [[package]]
 name = "rustc_version"
@@ -2325,16 +2293,16 @@ version = "0.4.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "bfa0f585226d2e68097d4f95d113b15b83a82e819ab25717ec0590d9584ef366"
 dependencies = [
- "semver 1.0.21",
+ "semver 1.0.23",
 ]
 
 [[package]]
 name = "rustix"
-version = "0.38.31"
+version = "0.38.34"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6ea3e1a662af26cd7a3ba09c0297a31af215563ecf42817c98df621387f4e949"
+checksum = "70dc5ec042f7a43c4a73241207cecc9873a06d45debb38b329f8541d85c2730f"
 dependencies = [
- "bitflags 2.4.2",
+ "bitflags",
  "errno",
  "libc",
  "linux-raw-sys",
@@ -2343,15 +2311,15 @@ dependencies = [
 
 [[package]]
 name = "rustversion"
-version = "1.0.14"
+version = "1.0.17"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7ffc183a10b4478d04cbbbfc96d0873219d962dd5accaff2ffbd4ceb7df837f4"
+checksum = "955d28af4278de8121b7ebeb796b6a45735dc01436d898801014aced2773a3d6"
 
 [[package]]
 name = "ryu"
-version = "1.0.16"
+version = "1.0.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f98d2aa92eebf49b69786be48e4477826b256916e84a57ff2a4f21923b48eb4c"
+checksum = "f3cb5ba0dc43242ce17de99c180e96db90b235b8a9fdc9543c96d2209116bd9f"
 
 [[package]]
 name = "safe_arch"
@@ -2376,35 +2344,35 @@ checksum = "d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac"
 
 [[package]]
 name = "semver"
-version = "1.0.21"
+version = "1.0.23"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b97ed7a9823b74f99c7742f5336af7be5ecd3eeafcb1507d1fa93347b1d589b0"
+checksum = "61697e0a1c7e512e84a621326239844a24d8207b4669b41bc18b32ea5cbf988b"
 
 [[package]]
 name = "serde"
-version = "1.0.197"
+version = "1.0.203"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3fb1c873e1b9b056a4dc4c0c198b24c3ffa059243875552b2bd0933b1aee4ce2"
+checksum = "7253ab4de971e72fb7be983802300c30b5a7f0c2e56fab8abfc6a214307c0094"
 dependencies = [
  "serde_derive",
 ]
 
 [[package]]
 name = "serde_derive"
-version = "1.0.197"
+version = "1.0.203"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7eb0b34b42edc17f6b7cac84a52a1c5f0e1bb2227e997ca9011ea3dd34e8610b"
+checksum = "500cbc0ebeb6f46627f50f3f5811ccf6bf00643be300b4c3eabc0ef55dc5b5ba"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "serde_json"
-version = "1.0.114"
+version = "1.0.117"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c5f09b1bd632ef549eaa9f60a1f8de742bdbc698e6cee2095fc84dde5f549ae0"
+checksum = "455182ea6142b14f93f4bc5320a2b31c1f266b66a4a5c858b013302a5d8cbfc3"
 dependencies = [
  "indexmap",
  "itoa",
@@ -2426,15 +2394,16 @@ dependencies = [
 
 [[package]]
 name = "serde_with"
-version = "3.6.0"
+version = "3.8.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1b0ed1662c5a68664f45b76d18deb0e234aff37207086803165c961eb695e981"
+checksum = "0ad483d2ab0149d5a5ebcd9972a3852711e0153d863bf5a5d0391d28883c4a20"
 dependencies = [
- "base64",
+ "base64 0.22.1",
  "chrono",
  "hex",
  "indexmap",
  "serde",
+ "serde_derive",
  "serde_json",
  "serde_with_macros",
  "time",
@@ -2442,14 +2411,14 @@ dependencies = [
 
 [[package]]
 name = "serde_with_macros"
-version = "3.6.0"
+version = "3.8.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "568577ff0ef47b879f736cd66740e022f3672788cdf002a05a4e609ea5a6fb15"
+checksum = "65569b702f41443e8bc8bbb1c5779bd0450bbe723b56198980e80ec45780bce2"
 dependencies = [
  "darling",
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -2480,9 +2449,9 @@ checksum = "0fda2ff0d084019ba4d7c6f371c95d8fd75ce3524c3cb8fb653a3023f6323e64"
 
 [[package]]
 name = "signal-hook-registry"
-version = "1.4.1"
+version = "1.4.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d8229b473baa5980ac72ef434c4415e70c4b5e71b423043adb4ba059f89c99a1"
+checksum = "a9e9e0b4211b72e7b8b6e85c807d36c212bdb33ea8587f7569562a84df5465b1"
 dependencies = [
  "libc",
 ]
@@ -2502,9 +2471,9 @@ dependencies = [
 
 [[package]]
 name = "similar"
-version = "2.4.0"
+version = "2.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "32fea41aca09ee824cc9724996433064c89f7777e60762749a4170a14abbfa21"
+checksum = "fa42c91313f1d05da9b26f267f931cf178d4aba455b4c4622dd7355eb80c6640"
 
 [[package]]
 name = "slab"
@@ -2517,18 +2486,18 @@ dependencies = [
 
 [[package]]
 name = "smallvec"
-version = "1.13.1"
+version = "1.13.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e6ecd384b10a64542d77071bd64bd7b231f4ed5940fba55e98c3de13824cf3d7"
+checksum = "3c5e1a9a646d36c3599cd173a41282daf47c44583ad367b8e6837255952e5c67"
 
 [[package]]
 name = "socket2"
-version = "0.5.5"
+version = "0.5.7"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7b5fac59a5cb5dd637972e5fca70daf0523c9067fcdc4842f053dae04a18f8e9"
+checksum = "ce305eb0b4296696835b71df73eb912e0f1ffd2556a501fcede6e0c50349191c"
 dependencies = [
  "libc",
- "windows-sys 0.48.0",
+ "windows-sys 0.52.0",
 ]
 
 [[package]]
@@ -2546,15 +2515,9 @@ dependencies = [
 
 [[package]]
 name = "strsim"
-version = "0.10.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "73473c0e59e6d5812c5dfe2a064a6444949f089e20eec9a2e5506596494e4623"
-
-[[package]]
-name = "strsim"
-version = "0.11.0"
+version = "0.11.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5ee073c9e4cd00e28217186dbe12796d692868f432bf2e97ee73bed0c56dfa01"
+checksum = "7da8b5736845d9f2fcb837ea5d9e2628564b3b043a70948a3f0b778838c5fb4f"
 
 [[package]]
 name = "strum"
@@ -2564,11 +2527,11 @@ checksum = "290d54ea6f91c969195bdbcd7442c8c2a2ba87da8bf60a7ee86a235d4bc1e125"
 
 [[package]]
 name = "strum"
-version = "0.26.1"
+version = "0.26.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "723b93e8addf9aa965ebe2d11da6d7540fa2283fcea14b3371ff055f7ba13f5f"
+checksum = "5d8cec3501a5194c432b2b7976db6b7d10ec95c253208b45f83f7136aa985e29"
 dependencies = [
- "strum_macros 0.26.1",
+ "strum_macros 0.26.2",
 ]
 
 [[package]]
@@ -2581,20 +2544,20 @@ dependencies = [
  "proc-macro2",
  "quote",
  "rustversion",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "strum_macros"
-version = "0.26.1"
+version = "0.26.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7a3417fc93d76740d974a01654a09777cb500428cc874ca9f45edfe0c4d4cd18"
+checksum = "c6cf59daf282c0a494ba14fd21610a0325f9f90ec9d1231dea26bcb1d696c946"
 dependencies = [
  "heck 0.4.1",
  "proc-macro2",
  "quote",
  "rustversion",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -2610,9 +2573,9 @@ dependencies = [
 
 [[package]]
 name = "syn"
-version = "2.0.48"
+version = "2.0.66"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0f3531638e407dfc0814761abb7c00a5b54992b849452a0646b7f65c9f770f3f"
+checksum = "c42f3f41a2de00b01c0aaad383c5a45241efc8b2d1eda5661812fda5f3cdcff5"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -2627,9 +2590,9 @@ checksum = "921f1e9c427802414907a48b21a6504ff6b3a15a1a3cf37e699590949ad9befc"
 
 [[package]]
 name = "tempfile"
-version = "3.10.0"
+version = "3.10.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a365e8cd18e44762ef95d87f284f4b5cd04107fec2ff3052bd6a3e6069669e67"
+checksum = "85b77fafb263dd9d05cbeac119526425676db3784113aa9295c88498cbf8bff1"
 dependencies = [
  "cfg-if",
  "fastrand",
@@ -2639,50 +2602,51 @@ dependencies = [
 
 [[package]]
 name = "test-log"
-version = "0.2.15"
+version = "0.2.16"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7b319995299c65d522680decf80f2c108d85b861d81dfe340a10d16cee29d9e6"
+checksum = "3dffced63c2b5c7be278154d76b479f9f9920ed34e7574201407f0b14e2bbb93"
 dependencies = [
  "env_logger",
  "test-log-macros",
+ "tracing-subscriber",
 ]
 
 [[package]]
 name = "test-log-macros"
-version = "0.2.15"
+version = "0.2.16"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c8f546451eaa38373f549093fe9fd05e7d2bade739e2ddf834b9968621d60107"
+checksum = "5999e24eaa32083191ba4e425deb75cdf25efefabe5aaccb7446dd0d4122a3f5"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "thiserror"
-version = "1.0.57"
+version = "1.0.61"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1e45bcbe8ed29775f228095caf2cd67af7a4ccf756ebff23a306bf3e8b47b24b"
+checksum = "c546c80d6be4bc6a00c0f01730c08df82eaa7a7a61f11d656526506112cc1709"
 dependencies = [
  "thiserror-impl",
 ]
 
 [[package]]
 name = "thiserror-impl"
-version = "1.0.57"
+version = "1.0.61"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a953cb265bef375dae3de6663da4d3804eee9682ea80d8e2542529b73c531c81"
+checksum = "46c3384250002a6d5af4d114f2845d37b57521033f30d5c3f46c4d70e1197533"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "thread_local"
-version = "1.1.7"
+version = "1.1.8"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3fdd6f064ccff2d6567adcb3873ca630700f00b5ad3f060c25b5dcfd9a4ce152"
+checksum = "8b9ef9bad013ada3808854ceac7b46812a6465ba368859a37e2100283d2d719c"
 dependencies = [
  "cfg-if",
  "once_cell",
@@ -2690,9 +2654,9 @@ dependencies = [
 
 [[package]]
 name = "time"
-version = "0.3.34"
+version = "0.3.36"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c8248b6521bb14bc45b4067159b9b6ad792e2d6d754d6c41fb50e29fefe38749"
+checksum = "5dfd88e563464686c916c7e46e623e520ddc6d79fa6641390f2e3fa86e83e885"
 dependencies = [
  "deranged",
  "itoa",
@@ -2711,9 +2675,9 @@ checksum = "ef927ca75afb808a4d64dd374f00a2adf8d0fcff8e7b184af886c3c87ec4a3f3"
 
 [[package]]
 name = "time-macros"
-version = "0.2.17"
+version = "0.2.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7ba3a3ef41e6672a2f0f001392bb5dcd3ff0a9992d618ca761a11c3121547774"
+checksum = "3f252a68540fde3a3877aeea552b832b40ab9a69e318efd078774a01ddee1ccf"
 dependencies = [
  "num-conv",
  "time-core",
@@ -2736,9 +2700,9 @@ checksum = "1f3ccbac311fea05f86f61904b462b55fb3df8837a366dfc601a0161d0532f20"
 
 [[package]]
 name = "tokio"
-version = "1.36.0"
+version = "1.37.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "61285f6515fa018fb2d1e46eb21223fff441ee8db5d0f1435e8ab4f5cdb80931"
+checksum = "1adbebffeca75fcfd058afa480fb6c0b81e165a0323f9c9d39c9697e37c46787"
 dependencies = [
  "backtrace",
  "bytes",
@@ -2753,16 +2717,15 @@ dependencies = [
 
 [[package]]
 name = "tokio-util"
-version = "0.7.10"
+version = "0.7.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5419f34732d9eb6ee4c3578b7989078579b7f039cbbb9ca2c4da015749371e15"
+checksum = "9cf6b47b3771c49ac75ad09a6162f53ad4b8088b76ac60e8ec1455b31a189fe1"
 dependencies = [
  "bytes",
  "futures-core",
  "futures-sink",
  "pin-project-lite",
  "tokio",
- "tracing",
 ]
 
 [[package]]
@@ -2785,7 +2748,7 @@ checksum = "34704c8d6ebcbc939824180af020566b01a7c01f80641264eba0999f6c2b6be7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
@@ -2856,6 +2819,12 @@ version = "0.4.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "22048bc95dfb2ffd05b1ff9a756290a009224b60b2f0e7525faeee7603851e63"
 
+[[package]]
+name = "typeid"
+version = "1.0.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "059d83cc991e7a42fc37bd50941885db0888e34209f8cfd9aab07ddec03bc9cf"
+
 [[package]]
 name = "typenum"
 version = "1.17.0"
@@ -2876,18 +2845,18 @@ checksum = "3354b9ac3fae1ff6755cb6db53683adb661634f67557942dea4facebec0fee4b"
 
 [[package]]
 name = "unicode-normalization"
-version = "0.1.22"
+version = "0.1.23"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5c5713f0fc4b5db668a2ac63cdb7bb4469d8c9fed047b1d0292cc7b0ce2ba921"
+checksum = "a56d1686db2308d901306f92a263857ef59ea39678a5458e7cb17f01415101f5"
 dependencies = [
  "tinyvec",
 ]
 
 [[package]]
 name = "unicode-width"
-version = "0.1.11"
+version = "0.1.12"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e51733f11c9c4f72aa0c160008246859e340b00807569a0da0e7a1079b27ba85"
+checksum = "68f5e5f3158ecfd4b8ff6fe086db7c8467a2dfdac97fe420f2b7c4aa97af66d6"
 
 [[package]]
 name = "url"
@@ -2941,9 +2910,9 @@ checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"
 
 [[package]]
 name = "wasm-bindgen"
-version = "0.2.91"
+version = "0.2.92"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c1e124130aee3fb58c5bdd6b639a0509486b0338acaaae0c84a5124b0f588b7f"
+checksum = "4be2531df63900aeb2bca0daaaddec08491ee64ceecbee5076636a3b026795a8"
 dependencies = [
  "cfg-if",
  "wasm-bindgen-macro",
@@ -2951,24 +2920,24 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-backend"
-version = "0.2.91"
+version = "0.2.92"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c9e7e1900c352b609c8488ad12639a311045f40a35491fb69ba8c12f758af70b"
+checksum = "614d787b966d3989fa7bb98a654e369c762374fd3213d212cfc0251257e747da"
 dependencies = [
  "bumpalo",
  "log",
  "once_cell",
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
  "wasm-bindgen-shared",
 ]
 
 [[package]]
 name = "wasm-bindgen-macro"
-version = "0.2.91"
+version = "0.2.92"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b30af9e2d358182b5c7449424f017eba305ed32a7010509ede96cdc4696c46ed"
+checksum = "a1f8823de937b71b9460c0c34e25f3da88250760bec0ebac694b49997550d726"
 dependencies = [
  "quote",
  "wasm-bindgen-macro-support",
@@ -2976,40 +2945,28 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro-support"
-version = "0.2.91"
+version = "0.2.92"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "642f325be6301eb8107a83d12a8ac6c1e1c54345a7ef1a9261962dfefda09e66"
+checksum = "e94f17b526d0a461a191c78ea52bbce64071ed5c04c9ffe424dcb38f74171bb7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
  "wasm-bindgen-backend",
  "wasm-bindgen-shared",
 ]
 
 [[package]]
 name = "wasm-bindgen-shared"
-version = "0.2.91"
+version = "0.2.92"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4f186bd2dcf04330886ce82d6f33dd75a7bfcf69ecf5763b89fcde53b6ac9838"
-
-[[package]]
-name = "which"
-version = "4.4.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "87ba24419a2078cd2b0f2ede2691b6c66d8e47836da3b6db8265ebad47afbfc7"
-dependencies = [
- "either",
- "home",
- "once_cell",
- "rustix",
-]
+checksum = "af190c94f2773fdb3729c55b007a722abb5384da03bc0986df4c289bf5567e96"
 
 [[package]]
 name = "wide"
-version = "0.7.15"
+version = "0.7.21"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "89beec544f246e679fc25490e3f8e08003bc4bf612068f325120dad4cea02c1c"
+checksum = "cd8dc749a1b03f3c255a3064a4f5c0ee5ed09b7c6bc6d4525d31f779cd74d7fc"
 dependencies = [
  "bytemuck",
  "safe_arch",
@@ -3043,7 +3000,7 @@ version = "0.52.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "33ab640c8d7e35bf8ba19b884ba838ceb4fba93a4e8c65a9059d08afcfc683d9"
 dependencies = [
- "windows-targets 0.52.0",
+ "windows-targets 0.52.5",
 ]
 
 [[package]]
@@ -3061,7 +3018,7 @@ version = "0.52.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "282be5f36a8ce781fad8c8ae18fa3f9beff57ec1b52cb3de0789201425d9a33d"
 dependencies = [
- "windows-targets 0.52.0",
+ "windows-targets 0.52.5",
 ]
 
 [[package]]
@@ -3081,17 +3038,18 @@ dependencies = [
 
 [[package]]
 name = "windows-targets"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8a18201040b24831fbb9e4eb208f8892e1f50a37feb53cc7ff887feb8f50e7cd"
+checksum = "6f0713a46559409d202e70e28227288446bf7841d3211583a4b53e3f6d96e7eb"
 dependencies = [
- "windows_aarch64_gnullvm 0.52.0",
- "windows_aarch64_msvc 0.52.0",
- "windows_i686_gnu 0.52.0",
- "windows_i686_msvc 0.52.0",
- "windows_x86_64_gnu 0.52.0",
- "windows_x86_64_gnullvm 0.52.0",
- "windows_x86_64_msvc 0.52.0",
+ "windows_aarch64_gnullvm 0.52.5",
+ "windows_aarch64_msvc 0.52.5",
+ "windows_i686_gnu 0.52.5",
+ "windows_i686_gnullvm",
+ "windows_i686_msvc 0.52.5",
+ "windows_x86_64_gnu 0.52.5",
+ "windows_x86_64_gnullvm 0.52.5",
+ "windows_x86_64_msvc 0.52.5",
 ]
 
 [[package]]
@@ -3102,9 +3060,9 @@ checksum = "2b38e32f0abccf9987a4e3079dfb67dcd799fb61361e53e2882c3cbaf0d905d8"
 
 [[package]]
 name = "windows_aarch64_gnullvm"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cb7764e35d4db8a7921e09562a0304bf2f93e0a51bfccee0bd0bb0b666b015ea"
+checksum = "7088eed71e8b8dda258ecc8bac5fb1153c5cffaf2578fc8ff5d61e23578d3263"
 
 [[package]]
 name = "windows_aarch64_msvc"
@@ -3114,9 +3072,9 @@ checksum = "dc35310971f3b2dbbf3f0690a219f40e2d9afcf64f9ab7cc1be722937c26b4bc"
 
 [[package]]
 name = "windows_aarch64_msvc"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bbaa0368d4f1d2aaefc55b6fcfee13f41544ddf36801e793edbbfd7d7df075ef"
+checksum = "9985fd1504e250c615ca5f281c3f7a6da76213ebd5ccc9561496568a2752afb6"
 
 [[package]]
 name = "windows_i686_gnu"
@@ -3126,9 +3084,15 @@ checksum = "a75915e7def60c94dcef72200b9a8e58e5091744960da64ec734a6c6e9b3743e"
 
 [[package]]
 name = "windows_i686_gnu"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a28637cb1fa3560a16915793afb20081aba2c92ee8af57b4d5f28e4b3e7df313"
+checksum = "88ba073cf16d5372720ec942a8ccbf61626074c6d4dd2e745299726ce8b89670"
+
+[[package]]
+name = "windows_i686_gnullvm"
+version = "0.52.5"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "87f4261229030a858f36b459e748ae97545d6f1ec60e5e0d6a3d32e0dc232ee9"
 
 [[package]]
 name = "windows_i686_msvc"
@@ -3138,9 +3102,9 @@ checksum = "8f55c233f70c4b27f66c523580f78f1004e8b5a8b659e05a4eb49d4166cca406"
 
 [[package]]
 name = "windows_i686_msvc"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ffe5e8e31046ce6230cc7215707b816e339ff4d4d67c65dffa206fd0f7aa7b9a"
+checksum = "db3c2bf3d13d5b658be73463284eaf12830ac9a26a90c717b7f771dfe97487bf"
 
 [[package]]
 name = "windows_x86_64_gnu"
@@ -3150,9 +3114,9 @@ checksum = "53d40abd2583d23e4718fddf1ebec84dbff8381c07cae67ff7768bbf19c6718e"
 
 [[package]]
 name = "windows_x86_64_gnu"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3d6fa32db2bc4a2f5abeacf2b69f7992cd09dca97498da74a151a3132c26befd"
+checksum = "4e4246f76bdeff09eb48875a0fd3e2af6aada79d409d33011886d3e1581517d9"
 
 [[package]]
 name = "windows_x86_64_gnullvm"
@@ -3162,9 +3126,9 @@ checksum = "0b7b52767868a23d5bab768e390dc5f5c55825b6d30b86c844ff2dc7414044cc"
 
 [[package]]
 name = "windows_x86_64_gnullvm"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1a657e1e9d3f514745a572a6846d3c7aa7dbe1658c056ed9c3344c4109a6949e"
+checksum = "852298e482cd67c356ddd9570386e2862b5673c85bd5f88df9ab6802b334c596"
 
 [[package]]
 name = "windows_x86_64_msvc"
@@ -3174,18 +3138,9 @@ checksum = "ed94fce61571a4006852b7389a063ab983c02eb1bb37b47f8272ce92d06d9538"
 
 [[package]]
 name = "windows_x86_64_msvc"
-version = "0.52.0"
+version = "0.52.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "dff9641d1cd4be8d1a070daf9e3773c5f67e78b4d9d42263020c057706765c04"
-
-[[package]]
-name = "yaml-rust"
-version = "0.4.5"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "56c1936c4cc7a1c9ab21a1ebb602eb942ba868cbd44a99cb7cdc5892335e1c85"
-dependencies = [
- "linked-hash-map",
-]
+checksum = "bec47e5bfd1bff0eeaf6d8b485cc1074891a197ab4225d504cb7a1ab88b02bf0"
 
 [[package]]
 name = "yansi"
@@ -3195,47 +3150,47 @@ checksum = "09041cd90cf85f7f8b2df60c646f853b7f535ce68f85244eb6731cf89fa498ec"
 
 [[package]]
 name = "zerocopy"
-version = "0.7.32"
+version = "0.7.34"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "74d4d3961e53fa4c9a25a8637fc2bfaf2595b3d3ae34875568a5cf64787716be"
+checksum = "ae87e3fcd617500e5d106f0380cf7b77f3c6092aae37191433159dda23cfb087"
 dependencies = [
  "zerocopy-derive",
 ]
 
 [[package]]
 name = "zerocopy-derive"
-version = "0.7.32"
+version = "0.7.34"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9ce1b18ccd8e73a9321186f97e46f9f04b778851177567b1975109d26a08d2a6"
+checksum = "15e934569e47891f7d9411f1a451d947a60e000ab3bd24fbb970f000387d1b3b"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.48",
+ "syn 2.0.66",
 ]
 
 [[package]]
 name = "zstd"
-version = "0.13.0"
+version = "0.13.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bffb3309596d527cfcba7dfc6ed6052f1d39dfbd7c867aa2e865e4a449c10110"
+checksum = "2d789b1514203a1120ad2429eae43a7bd32b90976a7bb8a05f7ec02fa88cc23a"
 dependencies = [
  "zstd-safe",
 ]
 
 [[package]]
 name = "zstd-safe"
-version = "7.0.0"
+version = "7.1.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "43747c7422e2924c11144d5229878b98180ef8b06cca4ab5af37afc8a8d8ea3e"
+checksum = "1cd99b45c6bc03a018c8b8a86025678c87e55526064e38f9df301989dce7ec0a"
 dependencies = [
  "zstd-sys",
 ]
 
 [[package]]
 name = "zstd-sys"
-version = "2.0.9+zstd.1.5.5"
+version = "2.0.10+zstd.1.5.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9e16efa8a874a0481a574084d34cc26fdb3b99627480f785888deb6386506656"
+checksum = "c253a4914af5bafc8fa8c86ee400827e83cf6ec01195ec1f1ed8441bf00d65aa"
 dependencies = [
  "cc",
  "pkg-config",
diff --git a/Cargo.toml b/Cargo.toml
index bc49cc1c..902648c2 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -27,49 +27,49 @@ biocommons-bioutils = "0.1.0"
 boolvec = "0.2"
 byteorder = "1.4"
 chrono = { version = "0.4", features = ["serde"] }
-clap-verbosity-flag = "2.2"
 clap = { version = "4.5", features = ["derive", "env"] }
+clap-verbosity-flag = "2.2"
 csv = "1.2"
 enum-map = { version = "2.7.3", features = ["serde"] }
 env_logger = "0.11"
+erased-serde = "0.4.2"
 flate2 = "1.0"
 indexmap = { version = "2.2", features = ["serde"] }
 indicatif = { version = "0.17", features = ["rayon"] }
+itertools = "0.13.0"
 log = "0.4"
-noodles-bed = "0.12"
-noodles-bgzf = "0.29"
-noodles-core = "0.14"
-noodles-csi = "0.33"
-noodles-tabix = "0.39"
-noodles-vcf = "0.55"
+noodles-bed = "0.13"
+noodles-bgzf = "0.30"
+noodles-core = "0.15"
+noodles-csi = "0.35"
+noodles-gff = "0.33.0"
+noodles-tabix = "0.41"
+noodles-vcf = "0.57"
 pbjson = "0.6"
 pbjson-types = "0.6"
 prost = "0.12"
 rayon = "1.8"
-rocksdb-utils-lookup = "0.3"
-rocksdb = { version = "0.21", features = ["multi-threaded-cf"] }
-serde_json = { version = "1.0", features=["preserve_order"] }
+rocksdb = { version = "0.22", features = ["multi-threaded-cf"] }
+rocksdb-utils-lookup = "0.4"
+rustc-hash = "1.1.0"
 serde = { version = "1.0", features = ["derive"] }
+serde_json = { version = "1.0", features=["preserve_order"] }
 serde_with = { version = "3.6", features=["alloc", "macros", "indexmap_2"], default-features = false }
 strum = { version = "0.26", features = ["strum_macros", "derive"] }
 thiserror = "1.0"
 tracing = "0.1"
 tracing-subscriber = "0.3"
-rustc-hash = "1.1.0"
-noodles-gff = "0.27.0"
-erased-serde = "0.4.2"
-itertools = "0.11.0"
 
 [build-dependencies]
-prost-build = "0.12"
-pbjson-build = "0.6"
 anyhow = "1.0"
+pbjson-build = "0.6"
+prost-build = "0.12"
 
 [dev-dependencies]
 insta = { version = "1.36", features = ["yaml"] }
 log = "0.4"
 pretty_assertions = "1.4"
-rstest = "0.18.2"
+rstest = "0.19.0"
 temp_testdir = "0.2"
 test-log = "0.2"
 tracing-subscriber = "0.3"
diff --git a/src/gnomad_sv/cli/import/gnomad_cnv4.rs b/src/gnomad_sv/cli/import/gnomad_cnv4.rs
index b2304dee..3b73833c 100644
--- a/src/gnomad_sv/cli/import/gnomad_cnv4.rs
+++ b/src/gnomad_sv/cli/import/gnomad_cnv4.rs
@@ -2,7 +2,7 @@
 
 use itertools::Itertools;
 use noodles_vcf::variant::record::Ids;
-use std::{str::FromStr, sync::Arc};
+use std::{fmt, str::FromStr, sync::Arc};
 
 use crate::{
     common::noodles::{get_f32, get_i32, get_string, get_vec_str},
@@ -45,17 +45,17 @@ impl FromStr for Population {
     }
 }
 
-impl ToString for Population {
-    fn to_string(&self) -> String {
+impl fmt::Display for Population {
+    fn fmt(&self, f: &mut fmt::Formatter) -> fmt::Result {
         match self {
-            Population::Afr => "AFR".to_string(),
-            Population::Amr => "AMR".to_string(),
-            Population::Asj => "ASJ".to_string(),
-            Population::Eas => "EAS".to_string(),
-            Population::Fin => "FIN".to_string(),
-            Population::Mid => "MID".to_string(),
-            Population::Nfe => "NFE".to_string(),
-            Population::Sas => "SAS".to_string(),
+            Population::Afr => write!(f, "AFR"),
+            Population::Amr => write!(f, "AMR"),
+            Population::Asj => write!(f, "ASJ"),
+            Population::Eas => write!(f, "EAS"),
+            Population::Fin => write!(f, "FIN"),
+            Population::Mid => write!(f, "MID"),
+            Population::Nfe => write!(f, "NFE"),
+            Population::Sas => write!(f, "SAS"),
             _ => unreachable!("unknown population: {:?}", self),
         }
     }
diff --git a/src/gnomad_sv/cli/import/gnomad_sv2.rs b/src/gnomad_sv/cli/import/gnomad_sv2.rs
index da2947c0..5398fb38 100644
--- a/src/gnomad_sv/cli/import/gnomad_sv2.rs
+++ b/src/gnomad_sv/cli/import/gnomad_sv2.rs
@@ -3,7 +3,7 @@
 //! Note that gnomAD v2 did not have distinction between different cohorts within
 //! one file.  Rather, there is one file for each cohort (all, controls, non-neuro).
 
-use std::{str::FromStr, sync::Arc};
+use std::{fmt, str::FromStr, sync::Arc};
 
 use itertools::Itertools;
 use noodles_vcf::variant::record::Ids;
@@ -48,17 +48,16 @@ impl FromStr for Population {
     }
 }
 
-impl ToString for Population {
-    fn to_string(&self) -> String {
+impl fmt::Display for Population {
+    fn fmt(&self, f: &mut fmt::Formatter) -> fmt::Result {
         match self {
-            Population::Afr => "AFR",
-            Population::Amr => "AMR",
-            Population::Eas => "EAS",
-            Population::Eur => "EUR",
-            Population::Other => "OTH",
+            Population::Afr => write!(f, "AFR"),
+            Population::Amr => write!(f, "AMR"),
+            Population::Eas => write!(f, "EAS"),
+            Population::Eur => write!(f, "EUR"),
+            Population::Other => write!(f, "OTH"),
             _ => unreachable!("unknown population: {:?}", self),
         }
-        .to_string()
     }
 }
 
diff --git a/src/gnomad_sv/cli/import/gnomad_sv4.rs b/src/gnomad_sv/cli/import/gnomad_sv4.rs
index d2785fe3..066bb1e0 100644
--- a/src/gnomad_sv/cli/import/gnomad_sv4.rs
+++ b/src/gnomad_sv/cli/import/gnomad_sv4.rs
@@ -3,7 +3,7 @@
 //! Note that gnomAD v2 did not have distinction between different cohorts within
 //! one file.  Rather, there is one file for each cohort (all, controls, non-neuro).
 
-use std::{str::FromStr, sync::Arc};
+use std::{fmt, str::FromStr, sync::Arc};
 
 use indicatif::ParallelProgressIterator as _;
 use noodles_vcf::variant::record::Ids;
@@ -63,22 +63,21 @@ impl FromStr for Population {
     }
 }
 
-impl ToString for Population {
-    fn to_string(&self) -> String {
+impl fmt::Display for Population {
+    fn fmt(&self, f: &mut fmt::Formatter) -> fmt::Result {
         match self {
-            Population::Afr => "AFR",
-            Population::Ami => "AMI",
-            Population::Amr => "AMR",
-            Population::Asj => "ASJ",
-            Population::Eas => "EAS",
-            Population::Fin => "FIN",
-            Population::Mid => "MID",
-            Population::Nfe => "NFE",
-            Population::Sas => "SAS",
-            Population::Other => "OTH",
+            Population::Afr => write!(f, "AFR"),
+            Population::Ami => write!(f, "AMI"),
+            Population::Amr => write!(f, "AMR"),
+            Population::Asj => write!(f, "ASJ"),
+            Population::Eas => write!(f, "EAS"),
+            Population::Fin => write!(f, "FIN"),
+            Population::Mid => write!(f, "MID"),
+            Population::Nfe => write!(f, "NFE"),
+            Population::Sas => write!(f, "SAS"),
+            Population::Other => write!(f, "OTH"),
             _ => unreachable!("unknown population: {:?}", self),
         }
-        .to_string()
     }
 }
 
diff --git a/src/server/actix_server/annos_db_info.rs b/src/server/actix_server/annos_db_info.rs
index 9fb0cb3e..84e064c9 100644
--- a/src/server/actix_server/annos_db_info.rs
+++ b/src/server/actix_server/annos_db_info.rs
@@ -5,9 +5,7 @@ use actix_web::{
     web::{self, Data, Json, Path},
     Responder,
 };
-use serde::{Deserialize, Serialize};
-
-use crate::server::DbInfo;
+use serde::Deserialize;
 
 use super::{error::CustomError, WebServerData};
 
@@ -20,13 +18,6 @@ struct Request {
     pub genome_release: String,
 }
 
-/// Result for `handle`.
-#[derive(Serialize, Debug, Clone)]
-struct ResultEntry {
-    /// Information for each database.
-    pub db_info: indexmap::IndexMap<String, DbInfo>,
-}
-
 /// Query for annotations for one variant.
 #[get("/annos/db-info")]
 async fn handle(
diff --git a/src/tsv/coding.rs b/src/tsv/coding.rs
index c3ef1627..41f7b9ef 100644
--- a/src/tsv/coding.rs
+++ b/src/tsv/coding.rs
@@ -221,7 +221,7 @@ impl Context {
                     // skip if not lifted to this genome build
                     return Ok(None);
                 } else if let serde_json::Value::String(chrom) = val {
-                    res.chrom = chrom.clone();
+                    res.chrom.clone_from(chrom);
                 } else {
                     return Err(error::Error::InvalidType(
                         self.config.col_chrom.clone(),
@@ -248,7 +248,7 @@ impl Context {
                 }
             } else if col.name == self.config.col_ref {
                 if let serde_json::Value::String(reference) = val {
-                    res.reference = reference.clone();
+                    res.reference.clone_from(reference);
                 } else {
                     return Err(error::Error::InvalidType(
                         self.config.col_ref.clone(),
@@ -257,7 +257,7 @@ impl Context {
                 }
             } else if col.name == self.config.col_alt {
                 if let serde_json::Value::String(alternative) = val {
-                    res.alternative = alternative.clone();
+                    res.alternative.clone_from(alternative);
                 } else {
                     return Err(error::Error::InvalidType(
                         self.config.col_alt.clone(),