Changelog

Here, the changes to anansnake will be summarized.

The format is based on Keep a Changelog.

Unreleased

[0.1.0] - 2023-11-23

Changed

all output folders can now be configured
running gimme maelstrom is now optional

Fixed

ANANSE errors ("No regions overlap")

[0.0.1] - 2023-01-12

Added

run differential gene expression analysis using DESeq2 from Seq2Science RNA-seq output
run peak enrichment analysis using gimmemotifs maelstrom from Seq2Science ATAC-seq output
obtain nonhuman transcription factor binding motifs using gimmemotifs motif2factors
run network differentiation analysis using ANANSE from Seq2Science ATAC-seq & RNA-seq output