From 5808e87eb4838a972c8c7de500fbbb54c90b9194 Mon Sep 17 00:00:00 2001 From: cat-bro Date: Mon, 14 Oct 2024 17:56:34 +1100 Subject: [PATCH] Revert "Revert "Revert "Revert "writable tmpfs for plot_ragtag_paf"""" --- .../dev/total_perspective_vortex/dev_tools.yml.j2 | 1 + .../production/total_perspective_vortex/tools.yml | 6 ++++++ 2 files changed, 7 insertions(+) diff --git a/files/galaxy/dynamic_job_rules/dev/total_perspective_vortex/dev_tools.yml.j2 b/files/galaxy/dynamic_job_rules/dev/total_perspective_vortex/dev_tools.yml.j2 index b9fef7168..90f46c5db 100644 --- a/files/galaxy/dynamic_job_rules/dev/total_perspective_vortex/dev_tools.yml.j2 +++ b/files/galaxy/dynamic_job_rules/dev/total_perspective_vortex/dev_tools.yml.j2 @@ -55,3 +55,4 @@ tools: toolshed.g2.bx.psu.edu/repos/galaxy-australia/plot_ragtag_paf/plot_ragtag_paf/.*: params: singularity_enabled: true + singularity_run_extra_arguments: --writable-tmpfs diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml index a12d2d148..95a557baa 100644 --- a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml +++ b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml @@ -3654,3 +3654,9 @@ tools: cores: 8 params: singularity_enabled: true + + toolshed.g2.bx.psu.edu/repos/galaxy-australia/plot_ragtag_paf/plot_ragtag_paf/.*: + params: + singularity_enabled: true + singularity_run_extra_arguments: --writable-tmpfs +