diff --git a/.gitignore b/.gitignore index 1c23a04..7471ca6 100644 --- a/.gitignore +++ b/.gitignore @@ -4,4 +4,7 @@ /build/ /PAGETools.egg-info/ /venv/ -/.idea/ \ No newline at end of file +/.idea/ +node_modules/ +.DS_Store +cache \ No newline at end of file diff --git a/docs/.vitepress/config.mts b/docs/.vitepress/config.mts new file mode 100644 index 0000000..35706ea --- /dev/null +++ b/docs/.vitepress/config.mts @@ -0,0 +1,64 @@ +import { defineConfig } from 'vitepress' + +// https://vitepress.dev/reference/site-config +export default defineConfig({ + title: "PAGETools", + description: "Documentation for the PAGETools python library", + themeConfig: { + // https://vitepress.dev/reference/default-theme-config + nav: [ + { text: 'Home', link: '/' }, + { text: 'Installation', link: '/installation' }, + { text: 'Tools', link: '/tools/index' }, + ], + + sidebar: [ + { + text: 'Installation', link: '/installation', + }, + { + text: 'Tools', + items: [ + { + text: "Analytics", + items: [ + { + text: "Get Codec", link: "/tools/analytics/get_codec" + }, + { + text: "Get Text Count", link: "/tools/analytics/get_text_count" + } + ] + }, + { + text: "Management", + items: [ + ] + }, + { + text: "Transformation", + items: [ + { + text: "Change Index", link: "/tools/transformation/change_index" + }, + { + text: "Extraction", link: "/tools/transformation/extraction" + }, + { + text: "Line2Page", link: "/tools/transformation/line2page" + }, + { + text: "Regularization", link: "/tools/transformation/regularization" + }, + ] + } + ] + } + ], + + socialLinks: [ + { icon: 'github', link: 'https://github.com/uniwue-zpd/PAGETools' }, + { icon: 'twitter', link: 'https://twitter.com/uniwue_zpd' } + ] + } +}) diff --git a/docs/.vitepress/theme/index.ts b/docs/.vitepress/theme/index.ts new file mode 100644 index 0000000..def4cfc --- /dev/null +++ b/docs/.vitepress/theme/index.ts @@ -0,0 +1,17 @@ +// https://vitepress.dev/guide/custom-theme +import { h } from 'vue' +import type { Theme } from 'vitepress' +import DefaultTheme from 'vitepress/theme' +import './style.css' + +export default { + extends: DefaultTheme, + Layout: () => { + return h(DefaultTheme.Layout, null, { + // https://vitepress.dev/guide/extending-default-theme#layout-slots + }) + }, + enhanceApp({ app, router, siteData }) { + // ... + } +} satisfies Theme diff --git a/docs/.vitepress/theme/style.css b/docs/.vitepress/theme/style.css new file mode 100644 index 0000000..d63aee8 --- /dev/null +++ b/docs/.vitepress/theme/style.css @@ -0,0 +1,139 @@ +/** + * Customize default theme styling by overriding CSS variables: + * https://github.com/vuejs/vitepress/blob/main/src/client/theme-default/styles/vars.css + */ + +/** + * Colors + * + * Each colors have exact same color scale system with 3 levels of solid + * colors with different brightness, and 1 soft color. + * + * - `XXX-1`: The most solid color used mainly for colored text. It must + * satisfy the contrast ratio against when used on top of `XXX-soft`. + * + * - `XXX-2`: The color used mainly for hover state of the button. + * + * - `XXX-3`: The color for solid background, such as bg color of the button. + * It must satisfy the contrast ratio with pure white (#ffffff) text on + * top of it. + * + * - `XXX-soft`: The color used for subtle background such as custom container + * or badges. It must satisfy the contrast ratio when putting `XXX-1` colors + * on top of it. + * + * The soft color must be semi transparent alpha channel. This is crucial + * because it allows adding multiple "soft" colors on top of each other + * to create a accent, such as when having inline code block inside + * custom containers. + * + * - `default`: The color used purely for subtle indication without any + * special meanings attched to it such as bg color for menu hover state. + * + * - `brand`: Used for primary brand colors, such as link text, button with + * brand theme, etc. + * + * - `tip`: Used to indicate useful information. The default theme uses the + * brand color for this by default. + * + * - `warning`: Used to indicate warning to the users. Used in custom + * container, badges, etc. + * + * - `danger`: Used to show error, or dangerous message to the users. Used + * in custom container, badges, etc. + * -------------------------------------------------------------------------- */ + + :root { + --vp-c-default-1: var(--vp-c-gray-1); + --vp-c-default-2: var(--vp-c-gray-2); + --vp-c-default-3: var(--vp-c-gray-3); + --vp-c-default-soft: var(--vp-c-gray-soft); + + --vp-c-brand-1: var(--vp-c-indigo-1); + --vp-c-brand-2: var(--vp-c-indigo-2); + --vp-c-brand-3: var(--vp-c-indigo-3); + --vp-c-brand-soft: var(--vp-c-indigo-soft); + + --vp-c-tip-1: var(--vp-c-brand-1); + --vp-c-tip-2: var(--vp-c-brand-2); + --vp-c-tip-3: var(--vp-c-brand-3); + --vp-c-tip-soft: var(--vp-c-brand-soft); + + --vp-c-warning-1: var(--vp-c-yellow-1); + --vp-c-warning-2: var(--vp-c-yellow-2); + --vp-c-warning-3: var(--vp-c-yellow-3); + --vp-c-warning-soft: var(--vp-c-yellow-soft); + + --vp-c-danger-1: var(--vp-c-red-1); + --vp-c-danger-2: var(--vp-c-red-2); + --vp-c-danger-3: var(--vp-c-red-3); + --vp-c-danger-soft: var(--vp-c-red-soft); +} + +/** + * Component: Button + * -------------------------------------------------------------------------- */ + +:root { + --vp-button-brand-border: transparent; + --vp-button-brand-text: var(--vp-c-white); + --vp-button-brand-bg: var(--vp-c-brand-3); + --vp-button-brand-hover-border: transparent; + --vp-button-brand-hover-text: var(--vp-c-white); + --vp-button-brand-hover-bg: var(--vp-c-brand-2); + --vp-button-brand-active-border: transparent; + --vp-button-brand-active-text: var(--vp-c-white); + --vp-button-brand-active-bg: var(--vp-c-brand-1); +} + +/** + * Component: Home + * -------------------------------------------------------------------------- */ + +:root { + --vp-home-hero-name-color: transparent; + --vp-home-hero-name-background: -webkit-linear-gradient( + 120deg, + #bd34fe 30%, + #41d1ff + ); + + --vp-home-hero-image-background-image: linear-gradient( + -45deg, + #bd34fe 50%, + #47caff 50% + ); + --vp-home-hero-image-filter: blur(44px); +} + +@media (min-width: 640px) { + :root { + --vp-home-hero-image-filter: blur(56px); + } +} + +@media (min-width: 960px) { + :root { + --vp-home-hero-image-filter: blur(68px); + } +} + +/** + * Component: Custom Block + * -------------------------------------------------------------------------- */ + +:root { + --vp-custom-block-tip-border: transparent; + --vp-custom-block-tip-text: var(--vp-c-text-1); + --vp-custom-block-tip-bg: var(--vp-c-brand-soft); + --vp-custom-block-tip-code-bg: var(--vp-c-brand-soft); +} + +/** + * Component: Algolia + * -------------------------------------------------------------------------- */ + +.DocSearch { + --docsearch-primary-color: var(--vp-c-brand-1) !important; +} + diff --git a/docs/index.md b/docs/index.md new file mode 100644 index 0000000..1a9bd8c --- /dev/null +++ b/docs/index.md @@ -0,0 +1,25 @@ +--- +# https://vitepress.dev/reference/default-theme-home-page +layout: home + +hero: + name: "PAGETools" + text: "Python powered PAGE XML toolkit" + tagline: + actions: + - theme: brand + text: Installation + link: /installation + - theme: alt + text: Tools + link: /tools + +features: + - title: Analytics + details: Analyze your PAGE XML datasets regarding various metrics + - title: Management + details: Easily manage your PAGE XML dataset through the CLI + - title: Transformations + details: Extract data from your existing PAGE files, generate new PAGE XML datasets and much more +--- + diff --git a/docs/installation.md b/docs/installation.md new file mode 100644 index 0000000..121bfda --- /dev/null +++ b/docs/installation.md @@ -0,0 +1,16 @@ +## Installation +### Installation using pip +The suggested method is to install `pagetools` into a virtual environment using pip: +```bash +python -m venv VENV_NAME +source VENV_NAME/bin/activate +pip install pagetools +``` +To install the package from source, clone this repository and run inside the project directory +```bash +git clone https://github.com/uniwue-zpd/PAGETools +cd PAGETools +python -m venv VENV_NAME +source VENV_NAME/bin/activate +pip install . +``` \ No newline at end of file diff --git a/docs/package.json b/docs/package.json new file mode 100644 index 0000000..c14ea35 --- /dev/null +++ b/docs/package.json @@ -0,0 +1,11 @@ +{ + "scripts": { + "docs:dev": "vitepress dev", + "docs:build": "vitepress build", + "docs:preview": "vitepress preview" + }, + "devDependencies": { + "vitepress": "^1.0.0-rc.29", + "vue": "^3.3.8" + } +} diff --git a/docs/tools/analytics/get_codec.md b/docs/tools/analytics/get_codec.md new file mode 100644 index 0000000..5381b91 --- /dev/null +++ b/docs/tools/analytics/get_codec.md @@ -0,0 +1,33 @@ +# Get Codec +## Usage +``` +Usage: pagetools get-codec [OPTIONS] FILES... + + Retrieves codec of PAGE XML files. + +Options: + -l, --level [region|line|word|glyph] + [default: line] + -idx, --index INTEGER Considers only text from TextEquiv elements + with a certain index. + -mc, --most-common INTEGER Only prints n most common entries. Shows all + by default. + -o, --output TEXT File to which results are written. + -rw, --remove-whitespace + -of, --output-format [json|csv|txt] + Available result formats. + -freq, --frequencies Outputs character frequencies. + -nu, --normalize-unicode [NFC|NFD|NFKC|NFKD] + Normalize unicode for both rules and PAGE + XML tests. + --text-output-newline Inserts new line after every character in + txt output. Only applies when frequencies + aren't output. + --verbose / --silent Choose between verbose or silent output. + --help Show this message and exit. +``` + +## Example +::: info +TODO +::: \ No newline at end of file diff --git a/docs/tools/analytics/get_text_count.md b/docs/tools/analytics/get_text_count.md new file mode 100644 index 0000000..d1a675d --- /dev/null +++ b/docs/tools/analytics/get_text_count.md @@ -0,0 +1,20 @@ +# Get Text Count +## Usage +``` +Usage: pagetools get-text-count [OPTIONS] FILES... + + Returns the amount of text equiv elements in certain elements for certain + indices. + +Options: + -e, --element [TextRegion|TextLine|Word] + -i, --index TEXT [required] + -so, --stats-out TEXT Output directory for detailed stats csv + file. + --help Show this message and exit. + +``` +## Example +::: info +TODO +::: \ No newline at end of file diff --git a/docs/tools/index.md b/docs/tools/index.md new file mode 100644 index 0000000..99ec441 --- /dev/null +++ b/docs/tools/index.md @@ -0,0 +1,13 @@ +# Tools +## Analytics +- [Get Codec](/tools/analytics/get_codec): Get overview of all used characters (codec) in a data set +- [Get Text Count](/tools/analytics/get_text_count): Get overview of text contained in data set +## Management +:::info +TODO +::: +## Transformation +- [Change Index](/tools/analytics/get_codec): Change index of elements +- [Extraction](/tools/analytics/get_codec): Extract elements as images and optionally their text content +- [Line2Page](/tools/analytics/get_codec): Merges line images and line texts into combined images and PAGE XML files +- [Regularization](/tools/analytics/get_codec): Regularize the text content of PAGE XML files using custom rulesets. \ No newline at end of file diff --git a/docs/tools/transformation/change_index.md b/docs/tools/transformation/change_index.md new file mode 100644 index 0000000..677efa9 --- /dev/null +++ b/docs/tools/transformation/change_index.md @@ -0,0 +1,16 @@ +# Change Index +## Usage +``` +Usage: pagetools change-index [OPTIONS] XMLS... SOURCE TARGET + + Change index on TextEquiv elements. + +Options: + -s, --safe / -us, --unsafe Creates backups of original files before + overwriting. + --help Show this message and exit. +``` +## Example +::: info +TODO +::: \ No newline at end of file diff --git a/docs/tools/transformation/extraction.md b/docs/tools/transformation/extraction.md new file mode 100644 index 0000000..20a2f59 --- /dev/null +++ b/docs/tools/transformation/extraction.md @@ -0,0 +1,51 @@ +# Extraction +## Usage +``` +Usage: pagetools extract [OPTIONS] XMLS... + + Extract elements as image (optionally with text) files. + +Options: + --include [TextRegion|ImageRegion|LineDrawingRegion|GraphicRegion|TableRegion|ChartRegion|MapRegion|SeparatorRegion|MathsRegion|ChemRegion|MusicRegion|AdvertRegion|NoiseRegion|NoiseRegion|UnknownRegion|CustomRegion|TextLine|*] + PAGE XML element types to extract (highest + priority). + --exclude [TextRegion|ImageRegion|LineDrawingRegion|GraphicRegion|TableRegion|ChartRegion|MapRegion|SeparatorRegion|MathsRegion|ChemRegion|MusicRegion|AdvertRegion|NoiseRegion|NoiseRegion|UnknownRegion|CustomRegion|TextLine|*] + PAGE XML element types to exclude from + extraction (lowest priority). + --no-text Suppresses text extraction. + -ie, --image-extension TEXT Extension of image files. Must be in the + same directory as corresponding XML file. + [default: .png] + -o, --output TEXT Path where generated files will get saved. + -e, --enumerate-output Enumerates output file names instead of + using original names. + -z, --zip-output Add generated output to zip archive. + -bg, --background-color INTEGER... + RGB color code used to fill up background. + Used when padding and / or deskewing. + [default: 255, 255, 255] + --background-mode [median|mean|dominant] + Color calc mode to fill up background + (overwrites -bg / --background-color). + -p, --padding INTEGER... Padding in pixels around the line image + cutout (top, bottom, left, right). + [default: 0, 0, 0, 0] + -ad, --auto-deskew Automatically deskew extracted line images + using a custom algorithm (Experimental!). + -d, --deskew FLOAT Angle for manual clockwise rotation of the + line images. [default: 0.0] + -gt, --gt-index INTEGER Index of the TextEquiv elements containing + ground truth. [default: 0] + -pred, --pred-index INTEGER Index of the TextEquiv elements containing + predicted text. [default: 1] + --help Show this message and exit. +``` + +## Example +Only extract `TextLine` elements: +``` +pagetools extract /*.xml -ie -o --include TextLine --exclude "*" +``` + +## Info +Pay in mind that --include / --exclude currently work different from e.g. the same arguments in `rsync` (due to limitations with the `click` library). Inclusion of certain element types always trumps exclusion of the same type, regardless of the order in the call. \ No newline at end of file diff --git a/docs/tools/transformation/line2page.md b/docs/tools/transformation/line2page.md new file mode 100644 index 0000000..933c0cf --- /dev/null +++ b/docs/tools/transformation/line2page.md @@ -0,0 +1,46 @@ +# Line2Page +## Usage +Merges line images with corresponding text-files in page-images and page-xml + +``` +Usage: pagetools line2page [OPTIONS] + + Merges line images and line texts into combined images and XML files + +Options: + -c, --creator TEXT Creator tag for PAGE XML [default: + PAGETools] + -s, --source-folder TEXT Path to images and GT [required] + -i, --image-folder TEXT Path to images [default: ] + -gt, --gt-folder TEXT Path to GT [default: ] + -d, --dest-folder TEXT Path where output gets stored [default: + /home/ocr4all/merged] + -e, --ext TEXT Image extension [default: .bin.png] + -p, --pred Sets flag to also include .pred.txt + [default: False] + -l, --lines INTEGER RANGE Lines per page [default: 20;x>=0] + -ls, --line-spacing INTEGER RANGE + Spacing between lines (in pixel) [default: + 5;x>=0] + -b, --border INTEGER RANGE... Border (in pixel): TOP BOTTOM LEFT RIGHT + [default: 10, 10, 10, 10;x>=0] + --debug [10|20|30|40|50] Sets the level of feedback to receive: + DEBUG=10, INFO=20, WARNING=30, ERROR=40, + CRITICAL=50 [default: 20] + --threads INTEGER RANGE Thread count to be used [default: 16;x>=1] + --xml-schema [2017|2019] Sets the year of the xml-Schema to be used + [default: 2019] + --help Show this message and exit. +``` + +## Example +::: info +TODO +::: + +## Info +Please note that each image file has to have the same name as its Ground Truth file. +``` +foo.nrm.png -> foo.gt.txt (& foo.pred.txt) +bar.bin.png -> bar.gt.txt (& bar.pred.txt) +``` \ No newline at end of file diff --git a/docs/tools/transformation/regularization.md b/docs/tools/transformation/regularization.md new file mode 100644 index 0000000..0c58279 --- /dev/null +++ b/docs/tools/transformation/regularization.md @@ -0,0 +1,26 @@ +# Regularization +## Usage +``` +Usage: pagetools regularize [OPTIONS] XMLS... + + Regularize the text content of PAGE XML files using custom rulesets. + +Options: + --remove-default [various|quotes|ligatures_consonantal|ligatures_vocal|roman_digits|uvius|punctuation|spaces] + Removes specified default ruleset. + --add-default [various|quotes|ligatures_consonantal|ligatures_vocal|roman_digits|uvius|punctuation|spaces] + Adds specified default ruleset. Overrides + all other default options. + -nd, --no-default Disables all default rulesets. + -r, --rules PATH File(s) which contains serialized ruleset. + -nu, --normalize-unicode [NFC|NFD|NFKC|NFKD] + Normalize unicode for both rules and PAGE + XML tests. + -s, --safe / -us, --unsafe Creates backups of original files before + overwriting. + --help Show this message and exit. +``` +## Example +::: info +TODO +::: diff --git a/docs/yarn.lock b/docs/yarn.lock new file mode 100644 index 0000000..ea48885 --- /dev/null +++ b/docs/yarn.lock @@ -0,0 +1,713 @@ +# THIS IS AN AUTOGENERATED FILE. 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