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ST not given for cgMLST #135

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mishmoods opened this issue Nov 24, 2023 · 1 comment
Open

ST not given for cgMLST #135

mishmoods opened this issue Nov 24, 2023 · 1 comment

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@mishmoods
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Hi. I am using the cgMLST scheme to test Gonorrhea samples. The output file does not provide an ST type for each sample. There is a number which specifies the allele at each locus, but no ST type.

@gregorysprenger
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Maybe it is novel? There is a section in the main readme that lists the differences in the missing sequence types: https://github.com/tseemann/mlst?tab=readme-ov-file#missing-data

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