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Get sequence of each from mlst commend line #129

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YaoXinZhi opened this issue Jan 2, 2023 · 0 comments

YaoXinZhi commented Jan 2, 2023

Hi,

I am using mlst for pneumocystis klebsiella typing.
I'm wondering how can I get the sequence of each gene directly from the mlst command line.

e.g.

GCF_000693595.1_Kleb_pneu_CHS_31_V1_genomic.fna klebsiella 258 gapA(3) infB(3) mdh(1) pgi(1) phoE(1) rpoB(1) tonB(79)

in this result, how can I get the sequence of gapA(3) or infB(3).

Best wishes,
Xinzhi Yao.

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