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DESCRIPTION
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DESCRIPTION
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Package: lulu
Type: Package
Title: Post Clustering Curation of Amplicon Data for Reliable Biodiversity Metrics
Version: 0.1.0
Authors@R: person("Tobias", "Guldberg Frøslev", email = "[email protected]",
role = c("aut", "cre"))
Maintainer: The package maintainer <[email protected]>
Description: The LULU algorithm excludes artefactual OTUs without discarding
rare, but real OTUs. The core mechanism is the identification and merging
of ‘daughter’ OTUs with consistently co-occurring, sequence-similar, but
more abundant ‘parent’ OTUs across a multi-sample dataset, under the
assumption that the ‘daughter’ OTUs are artefacts. The algorithm is
independent of a reference database, and can thus be applied to any OTU
table produced for any set of samples with any initial OTU definition
algorithm.
License: GNU General Public License v3 (GPL-3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1