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Uploaded data set #17

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tischi opened this issue Nov 27, 2020 · 2 comments
Open

Uploaded data set #17

tischi opened this issue Nov 27, 2020 · 2 comments

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@tischi
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tischi commented Nov 27, 2020

@joshmoore @will-moore

		OMEZarrS3Reader reader = new OMEZarrS3Reader( "https://s3.embl.de", "us-west-2", "i2k-2020" );
		SpimData em = reader.read( "em-raw.ome.zarr" );
		SpimData myosin = reader.read( "prospr-myosin.ome.zarr" );
@joshmoore
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@will-moore: I assume napari/napari#1018 et al would be useful in napari to provide the overlay of the two volumes.

@will-moore
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Don't know what's needed here? Are the 2 spim images not correctly aligned? Not obvious from that PR how to apply a transform but I guess some reading the source code would reveal it.

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@joshmoore @will-moore @tischi